| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is udg [H]
Identifier: 150005664
GI number: 150005664
Start: 3971963
End: 3973276
Strand: Direct
Name: udg [H]
Synonym: BVU_3154
Alternate gene names: 150005664
Gene position: 3971963-3973276 (Clockwise)
Preceding gene: 150005653
Following gene: 150005665
Centisome position: 76.93
GC content: 46.5
Gene sequence:
>1314_bases ATGAATATAGCGATTGTAGGAACCGGGTATGTAGGACTTGTTACCGGAACATGTTTTGCCGAAACTGGCGTAGACGTAAC TTGTGTAGATGTAAATGCGGATAAGATTGCTAATCTGCAACAGGGTATTATTCCTATTTATGAACCGGGATTGGAAGATA TGGTCTTGCGTAATGTAAAGGCTGGACGTCTTCATTTCACCACCTCTTTAGAGAGTTGTCTGGACAATGTGGATATTGTG TTCAGTGCTGTGGGTACTCCTCCCGATGAAGACGGAAGTGCCGATTTGCGTTATGTGCTTGAAGTTGCCAAGACGATTGG TGCTAATATGAAGAAATACACCTTGGTCGTGACCAAGAGTACGGTGCCCGTGGGTACGGCCCGGAAAGTAAAAGCGGCTA TCCGGGAGGAATTGGAGAAAAGAGGGGAGTCGATAGATTTCGATGTGGCTTCTAATCCGGAATTCTTGAAAGAAGGTAAT GCTATCGATGACTTTATGAGTCCGGACCGTGTGGTAGTGGGCGTAGAGTCGGAAAGGGCTAAAAAACTGATGACCAAGCT TTATAAACCTTTCATGCTGGTTAACTTCCGCGTTATCTTCATGGATATTCCTTCTGCCGAGATGACCAAGTATGCGGCAA ACTCCATGTTGGCTACCCGTATCAGCTTTATGAACGATATTGCCAACTTGTGCGAACTGGTGGGAGCTGATGTAAATATG GTACGTGACGGAATAGGTTCCGACAGTCGTATCGGGCGTAAGTTCTTGTATCCGGGATGCGGTTATGGTGGATCTTGTTT CCCGAAAGATGTGAAGGCGTTGATTAAGACTGCCGAGCAGAATGGTTATTCCATGCAGGTGTTGAAAGCGGTGGAAGATG TGAACGAGAATCAGAAAGGCATTTTGTTCGAGAAACTGGTAAAAGTATTCAATGGAGATTTGAAAGGCAAAACAGTGGCT TTGTGGGGACTTGCATTCAAGCCCGGTACGGACGATATGCGTGAGGCTCCGGCTTTGGTACTTATTGAGAAATTGAAACA GTCGGGTTGCAATGTCCGCGCATACGATCCTGCTGCTATGGATGAGTCCCGCCGCCGGATAGGAGAGTCGGTTTATTATG CGCACGATATGTATGATGCGGCTCTTGATGCGGATGCGTTGATTCTGGTAACCGAGTGGAAAGAGTTCCGTCTTCCTACC TGGGGAGTAATCAAGAAGGCGATGAAGCAGCCTGTAGTGCTTGACGGACGAAATATTTATGATGGTGACGAACTACAGGA AATGGGGTTTGTTTATCATTGCATCGGTCGATAA
Upstream 100 bases:
>100_bases TTATTCCGTTTCAGCGCAACTTTTATGGAAGAAAATAACAACTCACTCATAATTTATTGTAATTTTGCAGCGAAAAAGTT AGACTAACGAATTAAATAAA
Downstream 100 bases:
>100_bases ATAAAAAAATAGAGAGAATAACCATGTACAAACGTTTTTCGATAATAATGTTGGCTGTTGCGCTGTCTTCTTGTGGAACT CCGCAACAAAAAGCATCCGC
Product: UDP-glucose 6-dehydrogenase
Products: NA
Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MNIAIVGTGYVGLVTGTCFAETGVDVTCVDVNADKIANLQQGIIPIYEPGLEDMVLRNVKAGRLHFTTSLESCLDNVDIV FSAVGTPPDEDGSADLRYVLEVAKTIGANMKKYTLVVTKSTVPVGTARKVKAAIREELEKRGESIDFDVASNPEFLKEGN AIDDFMSPDRVVVGVESERAKKLMTKLYKPFMLVNFRVIFMDIPSAEMTKYAANSMLATRISFMNDIANLCELVGADVNM VRDGIGSDSRIGRKFLYPGCGYGGSCFPKDVKALIKTAEQNGYSMQVLKAVEDVNENQKGILFEKLVKVFNGDLKGKTVA LWGLAFKPGTDDMREAPALVLIEKLKQSGCNVRAYDPAAMDESRRRIGESVYYAHDMYDAALDADALILVTEWKEFRLPT WGVIKKAMKQPVVLDGRNIYDGDELQEMGFVYHCIGR
Sequences:
>Translated_437_residues MNIAIVGTGYVGLVTGTCFAETGVDVTCVDVNADKIANLQQGIIPIYEPGLEDMVLRNVKAGRLHFTTSLESCLDNVDIV FSAVGTPPDEDGSADLRYVLEVAKTIGANMKKYTLVVTKSTVPVGTARKVKAAIREELEKRGESIDFDVASNPEFLKEGN AIDDFMSPDRVVVGVESERAKKLMTKLYKPFMLVNFRVIFMDIPSAEMTKYAANSMLATRISFMNDIANLCELVGADVNM VRDGIGSDSRIGRKFLYPGCGYGGSCFPKDVKALIKTAEQNGYSMQVLKAVEDVNENQKGILFEKLVKVFNGDLKGKTVA LWGLAFKPGTDDMREAPALVLIEKLKQSGCNVRAYDPAAMDESRRRIGESVYYAHDMYDAALDADALILVTEWKEFRLPT WGVIKKAMKQPVVLDGRNIYDGDELQEMGFVYHCIGR >Mature_437_residues MNIAIVGTGYVGLVTGTCFAETGVDVTCVDVNADKIANLQQGIIPIYEPGLEDMVLRNVKAGRLHFTTSLESCLDNVDIV FSAVGTPPDEDGSADLRYVLEVAKTIGANMKKYTLVVTKSTVPVGTARKVKAAIREELEKRGESIDFDVASNPEFLKEGN AIDDFMSPDRVVVGVESERAKKLMTKLYKPFMLVNFRVIFMDIPSAEMTKYAANSMLATRISFMNDIANLCELVGADVNM VRDGIGSDSRIGRKFLYPGCGYGGSCFPKDVKALIKTAEQNGYSMQVLKAVEDVNENQKGILFEKLVKVFNGDLKGKTVA LWGLAFKPGTDDMREAPALVLIEKLKQSGCNVRAYDPAAMDESRRRIGESVYYAHDMYDAALDADALILVTEWKEFRLPT WGVIKKAMKQPVVLDGRNIYDGDELQEMGFVYHCIGR
Specific function: Unknown
COG id: COG1004
COG function: function code M; Predicted UDP-glucose 6-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=463, Percent_Identity=34.341252699784, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI296040438, Length=370, Percent_Identity=34.5945945945946, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI296040443, Length=319, Percent_Identity=34.7962382445141, Blast_Score=174, Evalue=2e-43, Organism=Escherichia coli, GI1788340, Length=365, Percent_Identity=29.8630136986301, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI48994968, Length=439, Percent_Identity=28.7015945330296, Blast_Score=144, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17560350, Length=458, Percent_Identity=34.9344978165939, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI17136908, Length=470, Percent_Identity=35.1063829787234, Blast_Score=258, Evalue=7e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR021157 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: =1.1.1.22 [H]
Molecular weight: Translated: 48148; Mature: 48148
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAIVGTGYVGLVTGTCFAETGVDVTCVDVNADKIANLQQGIIPIYEPGLEDMVLRNVK CEEEEEECCCEEHHCCHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHCCC AGRLHFTTSLESCLDNVDIVFSAVGTPPDEDGSADLRYVLEVAKTIGANMKKYTLVVTKS CCEEEEEEHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEC TVPVGTARKVKAAIREELEKRGESIDFDVASNPEFLKEGNAIDDFMSPDRVVVGVESERA CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCHHHHCCCCEEEEECCHHHH KKLMTKLYKPFMLVNFRVIFMDIPSAEMTKYAANSMLATRISFMNDIANLCELVGADVNM HHHHHHHHCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VRDGIGSDSRIGRKFLYPGCGYGGSCFPKDVKALIKTAEQNGYSMQVLKAVEDVNENQKG HHHCCCCCHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC ILFEKLVKVFNGDLKGKTVALWGLAFKPGTDDMREAPALVLIEKLKQSGCNVRAYDPAAM HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEECCCHHH DESRRRIGESVYYAHDMYDAALDADALILVTEWKEFRLPTWGVIKKAMKQPVVLDGRNIY HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCHHHHHHHHHCCCEEECCCCCC DGDELQEMGFVYHCIGR CCHHHHHHCHHHHCCCC >Mature Secondary Structure MNIAIVGTGYVGLVTGTCFAETGVDVTCVDVNADKIANLQQGIIPIYEPGLEDMVLRNVK CEEEEEECCCEEHHCCHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHCCC AGRLHFTTSLESCLDNVDIVFSAVGTPPDEDGSADLRYVLEVAKTIGANMKKYTLVVTKS CCEEEEEEHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEC TVPVGTARKVKAAIREELEKRGESIDFDVASNPEFLKEGNAIDDFMSPDRVVVGVESERA CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCHHHHCCCCEEEEECCHHHH KKLMTKLYKPFMLVNFRVIFMDIPSAEMTKYAANSMLATRISFMNDIANLCELVGADVNM HHHHHHHHCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VRDGIGSDSRIGRKFLYPGCGYGGSCFPKDVKALIKTAEQNGYSMQVLKAVEDVNENQKG HHHCCCCCHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC ILFEKLVKVFNGDLKGKTVALWGLAFKPGTDDMREAPALVLIEKLKQSGCNVRAYDPAAM HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEECCCHHH DESRRRIGESVYYAHDMYDAALDADALILVTEWKEFRLPTWGVIKKAMKQPVVLDGRNIY HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCHHHHHHHHHCCCEEECCCCCC DGDELQEMGFVYHCIGR CCHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]