| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005635
Identifier: 150005635
GI number: 150005635
Start: 3947826
End: 3949556
Strand: Direct
Name: 150005635
Synonym: BVU_3124
Alternate gene names: NA
Gene position: 3947826-3949556 (Clockwise)
Preceding gene: 150005634
Following gene: 150005636
Centisome position: 76.46
GC content: 37.55
Gene sequence:
>1731_bases ATGATTACTCTACATAAAGGTCAATACCTGTCTGACGTAATGAGTGAGATTCCGTCAAACTGCATACTTTCCAAAAGAAT ACCCGGCTGTGGTGCTACCACTTTGGAGCTTGAAACCCAAAGAAATTCCATTATCGTAGTTCCCAATGTACCCGTCATCA AAAGCAAGTGCGGAAAATACAGCAATCTGTTAGGCGTTTATGAAGATGTCACAACAGATAAGATTCGCAATTATTTGACT AATAACAGACTACATAAGATAATGACTACTCCCGAAAGTTTTGGAAAAGTGAAAAACGCTTGCAGTGGTATTGACATTTA TAATCATTTCTTCCTGCTGATGGATGAATGCCACCAATTAATCAAGGATGTGGATTACAGAACGGACATAGTGCTGCCCA TGAATGACTTTTTTCGTTTCAAAAGCAAGGCTCTTGTTTCCGCCACTCCTATCGGATTCAGTGACCCAAGATTTAAAGAG TTTGAAACAGTGGAAGTAAGTGCCGATTATGATTACAGACAAGAAATTGCGGTTACACATACTTATAATATATACAAGGC AATAAGTGAATATTTAGGCAATCACACAGAGGAAACAGTCTGCTTTTTCGTCAATTCCGTGGTAATGATTTACTCCATAA TGAAACAGTTCGGCATATTGGAGGATTCTACCGTTTACTGTGCGCCAAAAAGCCGTTTGAAACTGAAAAATGAATACTCC TTTGATAATGCTTATAATGATTGGAACGCAGATACCATGAAGAAATATAACTTCTTCACTGGCAGATTCTTTACGGCATT CGACTTGGATTTGCCTTATCAGCCCGATTTGGTAATGGTTACAGACCCTTATAATTCCGAATATACCATACTTGACATAG ATACGGACTGCATACAGATTTGCGGAAGATTCCGTAACGGTATAAAATCGGCAACACATATCTATCGGGTGAATCCCGAA ATCATAACCAAAGACAGGGAACAGATAGAATGGGAAATTTCGGCACATGAATTTGCCTATAACACGATACAAACCTTATA CAAAAGTGCGGATAACAGAGAAAGCAGATTCGCTTTCGGTGCAGTTCTTGAAACCATGCCGTTCCGTAAATTCCTATATT CGGACTTTACAAAGAACTGGTTTGCCATAGACAATGAGATTAATTCCGTATTGGTGAACAACAGATACCAATCAAGACAA GAAATAAAGAACTGGTACAATGACTGCCATTTCTTCAATCCCACATTTGAGAATTGCGAATATAACGAGAATGACGAGAA ATTAAAGATTGCCAAGACTACACGCTCGGTAAAGGACAAACACAGAAAAATGGTACAACTTCTTAGTGAAATGGAAACTC CCTACTCGGAATACGCCTTAGATTTCATTAATGATATGCGGAAGATTGACCCGTTCATTGTGGAAGCGTTTGAGACTTTG GGCAAAGAGAGGATAGAAGAACTTAACTATTCCAAAAAGAAAATCAAAGAAGAAATGATTCTGACACAACGTAAGGGGAA TAAAGTTATCAGACTGGTTAAGAATATATTCAAGGTTGGTAACAGATATTCCAATGAGAAAATAGTTAATGAATTAACGA GAATATATGAGAGATTGAACATACACCCCGAAGAAAATATAGAACCGAAACTTATCGGTCTCTATTATCAAGCAAATCCA TTTAAATCGGGTAATATAAGAGGCTATCAATTAAATTCGGAATTAGTTTAG
Upstream 100 bases:
>100_bases AAGCCTATATAAGACTTAGAGGGCTGTTCCGTTTCGGAAAACTCTTTTTCAGCATAAGGAGAAGCGATGAATTTATAGAT TATCTAAACAGCAAAGGATT
Downstream 100 bases:
>100_bases CTAAATGGGACAAAATCTCATTTTCTTGCCTTTCTATACCCGATACAGAAATTAAGTAAAATGTCCCTATCAACCTTAAT AACTAATGAAACAGAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MITLHKGQYLSDVMSEIPSNCILSKRIPGCGATTLELETQRNSIIVVPNVPVIKSKCGKYSNLLGVYEDVTTDKIRNYLT NNRLHKIMTTPESFGKVKNACSGIDIYNHFFLLMDECHQLIKDVDYRTDIVLPMNDFFRFKSKALVSATPIGFSDPRFKE FETVEVSADYDYRQEIAVTHTYNIYKAISEYLGNHTEETVCFFVNSVVMIYSIMKQFGILEDSTVYCAPKSRLKLKNEYS FDNAYNDWNADTMKKYNFFTGRFFTAFDLDLPYQPDLVMVTDPYNSEYTILDIDTDCIQICGRFRNGIKSATHIYRVNPE IITKDREQIEWEISAHEFAYNTIQTLYKSADNRESRFAFGAVLETMPFRKFLYSDFTKNWFAIDNEINSVLVNNRYQSRQ EIKNWYNDCHFFNPTFENCEYNENDEKLKIAKTTRSVKDKHRKMVQLLSEMETPYSEYALDFINDMRKIDPFIVEAFETL GKERIEELNYSKKKIKEEMILTQRKGNKVIRLVKNIFKVGNRYSNEKIVNELTRIYERLNIHPEENIEPKLIGLYYQANP FKSGNIRGYQLNSELV
Sequences:
>Translated_576_residues MITLHKGQYLSDVMSEIPSNCILSKRIPGCGATTLELETQRNSIIVVPNVPVIKSKCGKYSNLLGVYEDVTTDKIRNYLT NNRLHKIMTTPESFGKVKNACSGIDIYNHFFLLMDECHQLIKDVDYRTDIVLPMNDFFRFKSKALVSATPIGFSDPRFKE FETVEVSADYDYRQEIAVTHTYNIYKAISEYLGNHTEETVCFFVNSVVMIYSIMKQFGILEDSTVYCAPKSRLKLKNEYS FDNAYNDWNADTMKKYNFFTGRFFTAFDLDLPYQPDLVMVTDPYNSEYTILDIDTDCIQICGRFRNGIKSATHIYRVNPE IITKDREQIEWEISAHEFAYNTIQTLYKSADNRESRFAFGAVLETMPFRKFLYSDFTKNWFAIDNEINSVLVNNRYQSRQ EIKNWYNDCHFFNPTFENCEYNENDEKLKIAKTTRSVKDKHRKMVQLLSEMETPYSEYALDFINDMRKIDPFIVEAFETL GKERIEELNYSKKKIKEEMILTQRKGNKVIRLVKNIFKVGNRYSNEKIVNELTRIYERLNIHPEENIEPKLIGLYYQANP FKSGNIRGYQLNSELV >Mature_576_residues MITLHKGQYLSDVMSEIPSNCILSKRIPGCGATTLELETQRNSIIVVPNVPVIKSKCGKYSNLLGVYEDVTTDKIRNYLT NNRLHKIMTTPESFGKVKNACSGIDIYNHFFLLMDECHQLIKDVDYRTDIVLPMNDFFRFKSKALVSATPIGFSDPRFKE FETVEVSADYDYRQEIAVTHTYNIYKAISEYLGNHTEETVCFFVNSVVMIYSIMKQFGILEDSTVYCAPKSRLKLKNEYS FDNAYNDWNADTMKKYNFFTGRFFTAFDLDLPYQPDLVMVTDPYNSEYTILDIDTDCIQICGRFRNGIKSATHIYRVNPE IITKDREQIEWEISAHEFAYNTIQTLYKSADNRESRFAFGAVLETMPFRKFLYSDFTKNWFAIDNEINSVLVNNRYQSRQ EIKNWYNDCHFFNPTFENCEYNENDEKLKIAKTTRSVKDKHRKMVQLLSEMETPYSEYALDFINDMRKIDPFIVEAFETL GKERIEELNYSKKKIKEEMILTQRKGNKVIRLVKNIFKVGNRYSNEKIVNELTRIYERLNIHPEENIEPKLIGLYYQANP FKSGNIRGYQLNSELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67591; Mature: 67591
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLHKGQYLSDVMSEIPSNCILSKRIPGCGATTLELETQRNSIIVVPNVPVIKSKCGKY CEEECCCHHHHHHHHHCCCCCEECCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHCCCH SNLLGVYEDVTTDKIRNYLTNNRLHKIMTTPESFGKVKNACSGIDIYNHFFLLMDECHQL HHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IKDVDYRTDIVLPMNDFFRFKSKALVSATPIGFSDPRFKEFETVEVSADYDYRQEIAVTH HHCCCCCCEEEEECHHHHHHHCCHHEEECCCCCCCCCCCCCEEEEEECCCCCHHHEEEEE TYNIYKAISEYLGNHTEETVCFFVNSVVMIYSIMKQFGILEDSTVYCAPKSRLKLKNEYS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCEECCCCC FDNAYNDWNADTMKKYNFFTGRFFTAFDLDLPYQPDLVMVTDPYNSEYTILDIDTDCIQI CCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEECCHHHHHH CGRFRNGIKSATHIYRVNPEIITKDREQIEWEISAHEFAYNTIQTLYKSADNRESRFAFG HHHHHHHHHHHHEEEECCHHHCCCCHHHEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHH AVLETMPFRKFLYSDFTKNWFAIDNEINSVLVNNRYQSRQEIKNWYNDCHFFNPTFENCE HHHHHHHHHHHHHHHHCCCEEEECCCHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCCCC YNENDEKLKIAKTTRSVKDKHRKMVQLLSEMETPYSEYALDFINDMRKIDPFIVEAFETL CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GKERIEELNYSKKKIKEEMILTQRKGNKVIRLVKNIFKVGNRYSNEKIVNELTRIYERLN HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC IHPEENIEPKLIGLYYQANPFKSGNIRGYQLNSELV CCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCC >Mature Secondary Structure MITLHKGQYLSDVMSEIPSNCILSKRIPGCGATTLELETQRNSIIVVPNVPVIKSKCGKY CEEECCCHHHHHHHHHCCCCCEECCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHCCCH SNLLGVYEDVTTDKIRNYLTNNRLHKIMTTPESFGKVKNACSGIDIYNHFFLLMDECHQL HHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IKDVDYRTDIVLPMNDFFRFKSKALVSATPIGFSDPRFKEFETVEVSADYDYRQEIAVTH HHCCCCCCEEEEECHHHHHHHCCHHEEECCCCCCCCCCCCCEEEEEECCCCCHHHEEEEE TYNIYKAISEYLGNHTEETVCFFVNSVVMIYSIMKQFGILEDSTVYCAPKSRLKLKNEYS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCEECCCCC FDNAYNDWNADTMKKYNFFTGRFFTAFDLDLPYQPDLVMVTDPYNSEYTILDIDTDCIQI CCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEECCHHHHHH CGRFRNGIKSATHIYRVNPEIITKDREQIEWEISAHEFAYNTIQTLYKSADNRESRFAFG HHHHHHHHHHHHEEEECCHHHCCCCHHHEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHH AVLETMPFRKFLYSDFTKNWFAIDNEINSVLVNNRYQSRQEIKNWYNDCHFFNPTFENCE HHHHHHHHHHHHHHHHCCCEEEECCCHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCCCC YNENDEKLKIAKTTRSVKDKHRKMVQLLSEMETPYSEYALDFINDMRKIDPFIVEAFETL CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GKERIEELNYSKKKIKEEMILTQRKGNKVIRLVKNIFKVGNRYSNEKIVNELTRIYERLN HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC IHPEENIEPKLIGLYYQANPFKSGNIRGYQLNSELV CCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA