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The map label for this gene is helD [H]

Identifier: 150005526

GI number: 150005526

Start: 3809396

End: 3811411

Strand: Reverse

Name: helD [H]

Synonym: BVU_3010

Alternate gene names: 150005526

Gene position: 3811411-3809396 (Counterclockwise)

Preceding gene: 150005527

Following gene: 150005524

Centisome position: 73.82

GC content: 43.7

Gene sequence:

>2016_bases
ATGGATATTATTGCTTTATTAGCTGCCAATATCGAACAGATGGATAAGGCCATTGAAGATAAATCCAAAGACGTAATGGA
GCACAAACTCTACTTGTGGGAAAATCTGTCCGAACTGGACCGAGCCGAGAAAAGTGCGGTCCGGCAGATAGTCACCCAAC
AAGTAGCAGCCAGCGAGTCCTTGGCCGAGAAAAAGAAACGTTATCGCAAAATGATGGCCATCCCCTATTTCGGTCGCATC
GACTTTCAAGAAAAAGGGCAACCCGAAGTCCTGCCATTATATATAGGTATACACTCATTTTTCAATCCTCCCACCAATGA
AAATCTGATACACGACTGGCGTGCCCCCATCTCCAGCATGTTCTATGATTATGAATTAGGAGAAGCACATTTCGACGCCC
CCTCGGGAGAAGTGAAAGGTAACATCCGTCTGAAACGCCAGTATCGCATCCGTGACGGAAAAATGGAATTCATGCTGGAA
AGTTCACTGAATATTCAAGATGACATCCTTCAGAAGGAATTGAGTGGAAACTCCGATGACCGGATGAAGAATATAGTCGC
CACCATCCAACGGGAACAGAATAAAATTATCCGTAATGATACATCGAACACCCTGATTATCCAGGGAGTAGCCGGTTCAG
GAAAAACATCCATCGCCTTGCACCGCGTAGCCTATCTGCTATATCGGCACAAAGGGGAAATCACGTCCAATGATATCCTG
ATCATTTCCCCCAATAAAGTATTTGCCGATTACATCTCGAACGTACTTCCCGAATTGGGAGAAGAAAAAATTGAAGAATG
CGGCTTTGAGGAATTAATGCTCAAAATACTGGACAACAAATATAAAATACAAACCTTCTTTGACCAGGTGGCCGAAATAC
TGGACAAAGAGGAAGAAGATTTTATAGAACGTATCCGATTCAAATCCACCACCGAATTTATCCAGCAGATGGATAAATAC
ATTCTATATTTGGAACAAAACGCATTTCGGCCAACCGACCTGAAAGCAGGGCGTATCCCTATCCCTGCCGAGTACCTGAA
AGAACGTTTCGCGGCATGGCACCGCCTGCCCATGCGAAGCCGTTTCCAACCAATGGCAGAAGAAATTGCCCGCGAACTGA
CTTTCACCTATCACCAAGAGCCGATGGGAAAAATACAGATACGGCAGTTGGGTAATGAACTGAAAAAGATGTTCAACAAT
AAAGACCTCGACTTGTACAAGGGATTTTATGACTGGCTGGGAAAACCGGAAATGTTCAAGCAGGGTAAAAACCGGAAATT
GGAATATGCGGATGTAGCTCCATTACTTTATTTGAAACTGGCCCTGGAAGATAATAAAACCATGTATGGCATCAAGCATC
TGCTGGTAGACGAAATGCAGGACTATACTCCGATACAATACAAAGTTCTGGCTAAATTATTCCCCTGCCGGAAAACAATA
TTGGGAGATGCAAAGCAATCAGTAAATCCATACAGTTCCACCACCTGCGAACAGATCCAACGTGTACTGGTCGGCTCGGA
AGTGATGAAGCTTTGTAAAAGTTATCGCTCCACGTATGAAATCACAGAGTTTGCCCAACGCATTGCCAAGAACGAGGAAC
TGGAAGCTATAGAGCGTCATGGAGAGGAACCGGCAGTCGCCTTGCTGCCTACTGAAAAGAAAGAGATAGAATGGATAGAA
AACCTCATCACCTCTTTCCTGAAAGGAGCTGATGTATCCATGGGTATTATATGCAAAACCGTAAAACAAGCGGACAAGTT
GTATGCAGCCATCAATCATTTGTCTGATAAGATCTGTTTGCTGACAGAAGAAAGTGTAGCTTTTGTCAATGGGGTGGTCA
TTACTACAGCCCACATGGCAAAAGGGCTGGAGTTTGACGAAGTGATTGTTCCATTTGTAACTGATAAAAACTATAGAACA
GAAATAGACCGCAGCATGTTATATGTAGCCTGCACCCGTGCCATGCATAAACTTTATATTTCCGCATCGGGTAATATAAG
TACATTTCTATCATAA

Upstream 100 bases:

>100_bases
ACATTAAACATATTTGTGTAATTTCGCCCGGTAATAAAACTACAAACCAATACGCGCTATGATATTTAACCGGACTGAAA
AGGAAGAAAAAGCCTATCTC

Downstream 100 bases:

>100_bases
GCATTGACAAAACATCATCCATTGCAGGAATGGCATGAAATCCATCCCTACAGTGGATGAGCAAGTCTGCAAAAGGGTAT
TCCTCCGTAAGGAATGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MDIIALLAANIEQMDKAIEDKSKDVMEHKLYLWENLSELDRAEKSAVRQIVTQQVAASESLAEKKKRYRKMMAIPYFGRI
DFQEKGQPEVLPLYIGIHSFFNPPTNENLIHDWRAPISSMFYDYELGEAHFDAPSGEVKGNIRLKRQYRIRDGKMEFMLE
SSLNIQDDILQKELSGNSDDRMKNIVATIQREQNKIIRNDTSNTLIIQGVAGSGKTSIALHRVAYLLYRHKGEITSNDIL
IISPNKVFADYISNVLPELGEEKIEECGFEELMLKILDNKYKIQTFFDQVAEILDKEEEDFIERIRFKSTTEFIQQMDKY
ILYLEQNAFRPTDLKAGRIPIPAEYLKERFAAWHRLPMRSRFQPMAEEIARELTFTYHQEPMGKIQIRQLGNELKKMFNN
KDLDLYKGFYDWLGKPEMFKQGKNRKLEYADVAPLLYLKLALEDNKTMYGIKHLLVDEMQDYTPIQYKVLAKLFPCRKTI
LGDAKQSVNPYSSTTCEQIQRVLVGSEVMKLCKSYRSTYEITEFAQRIAKNEELEAIERHGEEPAVALLPTEKKEIEWIE
NLITSFLKGADVSMGIICKTVKQADKLYAAINHLSDKICLLTEESVAFVNGVVITTAHMAKGLEFDEVIVPFVTDKNYRT
EIDRSMLYVACTRAMHKLYISASGNISTFLS

Sequences:

>Translated_671_residues
MDIIALLAANIEQMDKAIEDKSKDVMEHKLYLWENLSELDRAEKSAVRQIVTQQVAASESLAEKKKRYRKMMAIPYFGRI
DFQEKGQPEVLPLYIGIHSFFNPPTNENLIHDWRAPISSMFYDYELGEAHFDAPSGEVKGNIRLKRQYRIRDGKMEFMLE
SSLNIQDDILQKELSGNSDDRMKNIVATIQREQNKIIRNDTSNTLIIQGVAGSGKTSIALHRVAYLLYRHKGEITSNDIL
IISPNKVFADYISNVLPELGEEKIEECGFEELMLKILDNKYKIQTFFDQVAEILDKEEEDFIERIRFKSTTEFIQQMDKY
ILYLEQNAFRPTDLKAGRIPIPAEYLKERFAAWHRLPMRSRFQPMAEEIARELTFTYHQEPMGKIQIRQLGNELKKMFNN
KDLDLYKGFYDWLGKPEMFKQGKNRKLEYADVAPLLYLKLALEDNKTMYGIKHLLVDEMQDYTPIQYKVLAKLFPCRKTI
LGDAKQSVNPYSSTTCEQIQRVLVGSEVMKLCKSYRSTYEITEFAQRIAKNEELEAIERHGEEPAVALLPTEKKEIEWIE
NLITSFLKGADVSMGIICKTVKQADKLYAAINHLSDKICLLTEESVAFVNGVVITTAHMAKGLEFDEVIVPFVTDKNYRT
EIDRSMLYVACTRAMHKLYISASGNISTFLS
>Mature_671_residues
MDIIALLAANIEQMDKAIEDKSKDVMEHKLYLWENLSELDRAEKSAVRQIVTQQVAASESLAEKKKRYRKMMAIPYFGRI
DFQEKGQPEVLPLYIGIHSFFNPPTNENLIHDWRAPISSMFYDYELGEAHFDAPSGEVKGNIRLKRQYRIRDGKMEFMLE
SSLNIQDDILQKELSGNSDDRMKNIVATIQREQNKIIRNDTSNTLIIQGVAGSGKTSIALHRVAYLLYRHKGEITSNDIL
IISPNKVFADYISNVLPELGEEKIEECGFEELMLKILDNKYKIQTFFDQVAEILDKEEEDFIERIRFKSTTEFIQQMDKY
ILYLEQNAFRPTDLKAGRIPIPAEYLKERFAAWHRLPMRSRFQPMAEEIARELTFTYHQEPMGKIQIRQLGNELKKMFNN
KDLDLYKGFYDWLGKPEMFKQGKNRKLEYADVAPLLYLKLALEDNKTMYGIKHLLVDEMQDYTPIQYKVLAKLFPCRKTI
LGDAKQSVNPYSSTTCEQIQRVLVGSEVMKLCKSYRSTYEITEFAQRIAKNEELEAIERHGEEPAVALLPTEKKEIEWIE
NLITSFLKGADVSMGIICKTVKQADKLYAAINHLSDKICLLTEESVAFVNGVVITTAHMAKGLEFDEVIVPFVTDKNYRT
EIDRSMLYVACTRAMHKLYISASGNISTFLS

Specific function: Catalyzes the unwinding of duplex DNA in the 3' to 5' direction; this reaction is dependent on the hydrolysis of ATP [H]

COG id: COG3973

COG function: function code R; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 uvrD-like helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000212
- InterPro:   IPR014016 [H]

Pfam domain/function: PF00580 UvrD-helicase [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 77577; Mature: 77577

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIALLAANIEQMDKAIEDKSKDVMEHKLYLWENLSELDRAEKSAVRQIVTQQVAASES
CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEKKKRYRKMMAIPYFGRIDFQEKGQPEVLPLYIGIHSFFNPPTNENLIHDWRAPISSM
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHH
FYDYELGEAHFDAPSGEVKGNIRLKRQYRIRDGKMEFMLESSLNIQDDILQKELSGNSDD
HHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCHH
RMKNIVATIQREQNKIIRNDTSNTLIIQGVAGSGKTSIALHRVAYLLYRHKGEITSNDIL
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
IISPNKVFADYISNVLPELGEEKIEECGFEELMLKILDNKYKIQTFFDQVAEILDKEEED
EECCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH
FIERIRFKSTTEFIQQMDKYILYLEQNAFRPTDLKAGRIPIPAEYLKERFAAWHRLPMRS
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
RFQPMAEEIARELTFTYHQEPMGKIQIRQLGNELKKMFNNKDLDLYKGFYDWLGKPEMFK
HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
QGKNRKLEYADVAPLLYLKLALEDNKTMYGIKHLLVDEMQDYTPIQYKVLAKLFPCRKTI
CCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGDAKQSVNPYSSTTCEQIQRVLVGSEVMKLCKSYRSTYEITEFAQRIAKNEELEAIERH
HCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
GEEPAVALLPTEKKEIEWIENLITSFLKGADVSMGIICKTVKQADKLYAAINHLSDKICL
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
LTEESVAFVNGVVITTAHMAKGLEFDEVIVPFVTDKNYRTEIDRSMLYVACTRAMHKLYI
EECCCHHHHHHHHEEHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEE
SASGNISTFLS
ECCCCCHHHCC
>Mature Secondary Structure
MDIIALLAANIEQMDKAIEDKSKDVMEHKLYLWENLSELDRAEKSAVRQIVTQQVAASES
CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEKKKRYRKMMAIPYFGRIDFQEKGQPEVLPLYIGIHSFFNPPTNENLIHDWRAPISSM
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHH
FYDYELGEAHFDAPSGEVKGNIRLKRQYRIRDGKMEFMLESSLNIQDDILQKELSGNSDD
HHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCHH
RMKNIVATIQREQNKIIRNDTSNTLIIQGVAGSGKTSIALHRVAYLLYRHKGEITSNDIL
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
IISPNKVFADYISNVLPELGEEKIEECGFEELMLKILDNKYKIQTFFDQVAEILDKEEED
EECCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH
FIERIRFKSTTEFIQQMDKYILYLEQNAFRPTDLKAGRIPIPAEYLKERFAAWHRLPMRS
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
RFQPMAEEIARELTFTYHQEPMGKIQIRQLGNELKKMFNNKDLDLYKGFYDWLGKPEMFK
HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
QGKNRKLEYADVAPLLYLKLALEDNKTMYGIKHLLVDEMQDYTPIQYKVLAKLFPCRKTI
CCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGDAKQSVNPYSSTTCEQIQRVLVGSEVMKLCKSYRSTYEITEFAQRIAKNEELEAIERH
HCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
GEEPAVALLPTEKKEIEWIENLITSFLKGADVSMGIICKTVKQADKLYAAINHLSDKICL
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
LTEESVAFVNGVVITTAHMAKGLEFDEVIVPFVTDKNYRTEIDRSMLYVACTRAMHKLYI
EECCCHHHHHHHHEEHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEE
SASGNISTFLS
ECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]