Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005492
Identifier: 150005492
GI number: 150005492
Start: 3770975
End: 3772360
Strand: Reverse
Name: 150005492
Synonym: BVU_2976
Alternate gene names: NA
Gene position: 3772360-3770975 (Counterclockwise)
Preceding gene: 150005493
Following gene: 150005491
Centisome position: 73.06
GC content: 40.4
Gene sequence:
>1386_bases ATGAAAACAAAAATATGGGTAGGAGTTCTATTTTACTCTTTTATGGGATGTGCGAATAAGGCACCAAAATCAAATCTTAC AAGCAAATTAGACTCTACAGGTGAAGCTGTCTATTTTGTAGAAGATACTGTTGTTGACCAATCTGCAGGCTTGCAAGTCA TTGAAGCCTTAAGCAGGGTCTATGGAAATGATCCGAATTCTATAGGAGGTTTCATCGGTAGCCCGCGTTGCCCTTCTTTC TTGGAAGGTATGTTCTTTGACGGTTCCACGTTGGTTTTTCAGGTAAGAGGTGACACAGCGCATGCAAGGCGAATTTTGGA ATCTACTGCCGGTAGCAAAGCTTTTCGACTGGAGCAAGTTACTGAAAGTAATTATTCACAGCAACAACTTATGAGCATCG TAGACGAGTTGAACCAGCGGTTTGACACATTGACAGACAAGAAGCTGAAAAATAATATGACCAGTTGGGGTGTAGGATTA CGGAATGTTGAAGTCAGGTTTATTCTCAACACTCCCGAAGCCCGACAAGCATTCCGGGAAAAACTCATGGATTCTCCCGC CATTCGTTTTGAAGGACCGGAACAGCCGATAATAAATGAGCGAATTAGTATAACTGATACGCTCGGTATTTCCCTGCATC CGGAATATTCCGTTTACTCCACTGAGGCATCCACAGCTTCCTTTGTTTTGCTAAATCAAGGAAACAAGAACATAATGTGT GGCGAGCATTATTTCATTACTTATGAAGACGAGAATGGCACTTGGCGTGCATTGCCCATCAATGACGCTGCCATAGATAT AGGTTATATGGTACTTCCCGGTGGGCATCATTTGTTTACAGCAAATCTTTATCCCGAAGTTCACTCCAATAAACCGGGAC GTTACCGTTTTTTCTATGAAGTCATGCTTGATGCTGATACTCCATTGCGTCATGACATATTGATGATGACCGAATTTCGA TTGACTGATAATAAGCAAGAAATAAAAAATGCTATTAGAATAGAAATCCCCCAAAAACCGGATAATTATGGAGCTGGATT TATTCCTACTCAAGCTCCTCCAAAAGAAGATGAAGTTTATCATGTAGTGGATGACATGCCCGAATTTCCCGGTGGTATGG ATAAATTGTTACAATTCATCAACGACAATATGCAATATCCAACCAAAGCCCAAACAGAAGGAATACAAGGAAAAGTTATT GTTCAATTCATCATAGACGAAGACGGTTACATAATAGAACCTAACATAGTAAGGAGTGTTGAGTCTTCTTTGGATAATGA GGCACTACGTCTGATAAAAATGCTTCCTAAATGGAAACCCGGCACACTAAAAGGAAAAGCCATAAAGGTGAAATATACAG TCCCAGTAGCTTTTAAACTCAAATAA
Upstream 100 bases:
>100_bases ATCGTATTTCCACATCAATGTGGAATGATTTGGAGAAAATCAATCTCAATGCTGAATTTGAAATAGAATAAACATCCCTT TCACTAAACAATTCAATGTT
Downstream 100 bases:
>100_bases TAGCAACTATGAAACATTTATTACTCATATTCCCGTAATATTCGAAAATCACCATTCCCCTCGCAACAATGTGCTTGAAT AAAACGAAAAGCCCACCTTT
Product: outer membrane protein TonB
Products: NA
Alternate protein names: NB Protein; Conserved Transporter; Outer Membrane Protein nB; Nb Family Protein; NB-Dependent Receptor; Outer Membrane Transport Energization Protein nb; Outer Membrane Protein; Peptidase; NB Family Outer Membrane Receptor Protein; LOW QUALITY PROTEIN Outer Membrane Protein; Protein nB
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKTKIWVGVLFYSFMGCANKAPKSNLTSKLDSTGEAVYFVEDTVVDQSAGLQVIEALSRVYGNDPNSIGGFIGSPRCPSF LEGMFFDGSTLVFQVRGDTAHARRILESTAGSKAFRLEQVTESNYSQQQLMSIVDELNQRFDTLTDKKLKNNMTSWGVGL RNVEVRFILNTPEARQAFREKLMDSPAIRFEGPEQPIINERISITDTLGISLHPEYSVYSTEASTASFVLLNQGNKNIMC GEHYFITYEDENGTWRALPINDAAIDIGYMVLPGGHHLFTANLYPEVHSNKPGRYRFFYEVMLDADTPLRHDILMMTEFR LTDNKQEIKNAIRIEIPQKPDNYGAGFIPTQAPPKEDEVYHVVDDMPEFPGGMDKLLQFINDNMQYPTKAQTEGIQGKVI VQFIIDEDGYIIEPNIVRSVESSLDNEALRLIKMLPKWKPGTLKGKAIKVKYTVPVAFKLK
Sequences:
>Translated_461_residues MKTKIWVGVLFYSFMGCANKAPKSNLTSKLDSTGEAVYFVEDTVVDQSAGLQVIEALSRVYGNDPNSIGGFIGSPRCPSF LEGMFFDGSTLVFQVRGDTAHARRILESTAGSKAFRLEQVTESNYSQQQLMSIVDELNQRFDTLTDKKLKNNMTSWGVGL RNVEVRFILNTPEARQAFREKLMDSPAIRFEGPEQPIINERISITDTLGISLHPEYSVYSTEASTASFVLLNQGNKNIMC GEHYFITYEDENGTWRALPINDAAIDIGYMVLPGGHHLFTANLYPEVHSNKPGRYRFFYEVMLDADTPLRHDILMMTEFR LTDNKQEIKNAIRIEIPQKPDNYGAGFIPTQAPPKEDEVYHVVDDMPEFPGGMDKLLQFINDNMQYPTKAQTEGIQGKVI VQFIIDEDGYIIEPNIVRSVESSLDNEALRLIKMLPKWKPGTLKGKAIKVKYTVPVAFKLK >Mature_461_residues MKTKIWVGVLFYSFMGCANKAPKSNLTSKLDSTGEAVYFVEDTVVDQSAGLQVIEALSRVYGNDPNSIGGFIGSPRCPSF LEGMFFDGSTLVFQVRGDTAHARRILESTAGSKAFRLEQVTESNYSQQQLMSIVDELNQRFDTLTDKKLKNNMTSWGVGL RNVEVRFILNTPEARQAFREKLMDSPAIRFEGPEQPIINERISITDTLGISLHPEYSVYSTEASTASFVLLNQGNKNIMC GEHYFITYEDENGTWRALPINDAAIDIGYMVLPGGHHLFTANLYPEVHSNKPGRYRFFYEVMLDADTPLRHDILMMTEFR LTDNKQEIKNAIRIEIPQKPDNYGAGFIPTQAPPKEDEVYHVVDDMPEFPGGMDKLLQFINDNMQYPTKAQTEGIQGKVI VQFIIDEDGYIIEPNIVRSVESSLDNEALRLIKMLPKWKPGTLKGKAIKVKYTVPVAFKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52014; Mature: 52014
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKIWVGVLFYSFMGCANKAPKSNLTSKLDSTGEAVYFVEDTVVDQSAGLQVIEALSRV CCCEEEHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHH YGNDPNSIGGFIGSPRCPSFLEGMFFDGSTLVFQVRGDTAHARRILESTAGSKAFRLEQV HCCCCCCCCCCCCCCCCCHHHHCEEECCCEEEEEEECCHHHHHHHHHHCCCCCEEEEHHH TESNYSQQQLMSIVDELNQRFDTLTDKKLKNNMTSWGVGLRNVEVRFILNTPEARQAFRE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEECCCHHHHHHHH KLMDSPAIRFEGPEQPIINERISITDTLGISLHPEYSVYSTEASTASFVLLNQGNKNIMC HHHCCCCEEECCCCCCCCCCCEEEEEEECEEECCCCEEEECCCCCEEEEEEECCCCEEEE GEHYFITYEDENGTWRALPINDAAIDIGYMVLPGGHHLFTANLYPEVHSNKPGRYRFFYE CCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCHHCCCCCCCEEEEEE VMLDADTPLRHDILMMTEFRLTDNKQEIKNAIRIEIPQKPDNYGAGFIPTQAPPKEDEVY EEECCCCCCCCEEEEEEEEEECCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE HVVDDMPEFPGGMDKLLQFINDNMQYPTKAQTEGIQGKVIVQFIIDEDGYIIEPNIVRSV EHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCCCEEEEEEEECCCCEEECCHHHHHH ESSLDNEALRLIKMLPKWKPGTLKGKAIKVKYTVPVAFKLK HHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEC >Mature Secondary Structure MKTKIWVGVLFYSFMGCANKAPKSNLTSKLDSTGEAVYFVEDTVVDQSAGLQVIEALSRV CCCEEEHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHH YGNDPNSIGGFIGSPRCPSFLEGMFFDGSTLVFQVRGDTAHARRILESTAGSKAFRLEQV HCCCCCCCCCCCCCCCCCHHHHCEEECCCEEEEEEECCHHHHHHHHHHCCCCCEEEEHHH TESNYSQQQLMSIVDELNQRFDTLTDKKLKNNMTSWGVGLRNVEVRFILNTPEARQAFRE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEECCCHHHHHHHH KLMDSPAIRFEGPEQPIINERISITDTLGISLHPEYSVYSTEASTASFVLLNQGNKNIMC HHHCCCCEEECCCCCCCCCCCEEEEEEECEEECCCCEEEECCCCCEEEEEEECCCCEEEE GEHYFITYEDENGTWRALPINDAAIDIGYMVLPGGHHLFTANLYPEVHSNKPGRYRFFYE CCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCHHCCCCCCCEEEEEE VMLDADTPLRHDILMMTEFRLTDNKQEIKNAIRIEIPQKPDNYGAGFIPTQAPPKEDEVY EEECCCCCCCCEEEEEEEEEECCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE HVVDDMPEFPGGMDKLLQFINDNMQYPTKAQTEGIQGKVIVQFIIDEDGYIIEPNIVRSV EHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCCCEEEEEEEECCCCEEECCHHHHHH ESSLDNEALRLIKMLPKWKPGTLKGKAIKVKYTVPVAFKLK HHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA