Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005440
Identifier: 150005440
GI number: 150005440
Start: 3707326
End: 3708981
Strand: Reverse
Name: 150005440
Synonym: BVU_2923
Alternate gene names: NA
Gene position: 3708981-3707326 (Counterclockwise)
Preceding gene: 150005443
Following gene: 150005425
Centisome position: 71.84
GC content: 46.26
Gene sequence:
>1656_bases ATGACAAAGATACATTTTCGTCCTTACAATCCCAACCAAACCGTTCTTTTTCCTCAAAGAATTGATGAGGATATTGCAGA AAACGATCCGGTGCGCATGGTTGACGCCCTGGTTAAGGGCTTGAATCTTGAAAGTTTCAGAAAGCTGTATAAGGAATGCG GCCGCAGCCCTTACCACCCCAAGATGATGCTCAAGGTCATTCTGTATGCCTATATGAACAACATCTACTCCTGCCGGAAA ATTGAAAAGCTCCTTCACCGTGACATCCATTATATCTGGCTGGCCGGATATGAGAAACCGGATTTCATTACCATCAACCG TTTCCGCAACCGGGTGAAGAAGGAAATCAACGAGGTGTTTACGCAAACCGTACTCCTTCTCTCTTCCAAAGGCTTCATCA GCCTGAATGTGGAATACATTGACGGGACAAAGATTGAGTCCAAAGCCAATAAGTATACTTTCGTCTGGCGGAAAACGGTT GAGCGGAACCGTGAACGCCTGATGAAGAAGATACATATCCTGCTAGGGCAGATAGACAATGTCATCGCCCAGGAGAACTC ATCGGAAAGCAATGAGGAGATTGAGTTCACTCCAGCCATGCTGACTGAAATGGCTGGAGAATTGCGTCAAGCACTCGAAC AGGTTCCTGAACCCTCCACGAAAGAGGAAAAGACTGCGTTGAAAAAGAAACGCAAACAGCTGAAGGAGTTGGAAGAGCAC AGGGACAAGCTACAGGAATACGACAACCGTCTGGACACGCTGCAGGACAGGAATTCCTATTCCAAAACGGACAATGACGC TACTTTCATGAGAATGAAGGAGGATGCCATGCGCAACGGACAGACGAAGCCCGGTTACAACCTTCAAATCGGCACCGAAA ATCAGTTCATCACCGATTTTGCACTCTTCCCGAACCCTACGGATACACTGACCCTGATTCCTTTCCTGCAATCTTTTTCA AACAGGTATGACCGGATGGCCCATACGGTGGTTGCTGATTCCGGCTATGGCTCCGAAGAGAATTACCGCTTCATGTCCGA AAACGGCATGGAAGCCTACGTAAAGTACAACTATTTCCACATGGAGCAGCGGCCGAGATTCAAACCGGACCCGTTCAAGG CCGAAAACTTCTACTACAATGAAGAACATGACTTCTGCATCTGCCCTATGGGGCAAAGGATGCGGAGGATAGGCACCAGG AATGTGAAAACCGCATCCGGATATGTCAGCGAAAATGCACGGTACAGAGCTGTCAGGTGTGAAGGCTATCCCCTGCGATG CCGCTGTTTTAAAGCAAAAGGAAACAGGACGATAGAACTGAATCATAGGCTTAGACAATACAAGCGGAGAGCCAAAGAAC TGCTCTGCTCTGAGAAAGGACTGAAACACAGAGGGCAGAGATGCATAGAACCGGAAGCCGTGTTCGGACAAATTAAAAAC AATATGAACTACAAACGTTTCCGACATTTTGGAAAGGACAAGGTCTTCATGGACTTTGCCTTCCTAGCCATTGCCTTCAA TATAAAAAAGATGTGTGCAAAACTGACAAAAGAAGGTATGAACTGGCTGATTAGACTGTTTTATGAACTTACAACTGCTG TTTTTAGATGCTGGGAACACATAAATCAAAGAAATCTTCAAAAGATCGCAGCTTAA
Upstream 100 bases:
>100_bases TGCACCCCTTCTTTCTTTTACGCACAAAGCCCCGACTTTCACAAGCTGGGGCTTTGTTATTACCTAAAGATTTTGTATCT TTAGGCATAAGAATTTCACT
Downstream 100 bases:
>100_bases AGAAAATGAACAGATTTGTATAGTGATGAACAAAAAAGAGGTGCATCGTGCATTACGACACACCTTCTTTATGTCACTAT CAAAAAATTATATTAATAAC
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISPsy6 Transposase; Transposase Is4 Family Protein; Transposase IS4 Family; ISCpe5 Transposase; ISCps6 Transposase; ISNCY Family Transposase; LOW QUALITY PROTEIN ISNCY Family Transposase; Transposase Is4 Family; Transposase ISNCY Family Protein; ISPpu20 Transposase
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MTKIHFRPYNPNQTVLFPQRIDEDIAENDPVRMVDALVKGLNLESFRKLYKECGRSPYHPKMMLKVILYAYMNNIYSCRK IEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKKEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTV ERNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDFALFPNPTDTLTLIPFLQSFS NRYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTR NVKTASGYVSENARYRAVRCEGYPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKN NMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKEGMNWLIRLFYELTTAVFRCWEHINQRNLQKIAA
Sequences:
>Translated_551_residues MTKIHFRPYNPNQTVLFPQRIDEDIAENDPVRMVDALVKGLNLESFRKLYKECGRSPYHPKMMLKVILYAYMNNIYSCRK IEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKKEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTV ERNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDFALFPNPTDTLTLIPFLQSFS NRYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTR NVKTASGYVSENARYRAVRCEGYPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKN NMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKEGMNWLIRLFYELTTAVFRCWEHINQRNLQKIAA >Mature_550_residues TKIHFRPYNPNQTVLFPQRIDEDIAENDPVRMVDALVKGLNLESFRKLYKECGRSPYHPKMMLKVILYAYMNNIYSCRKI EKLLHRDIHYIWLAGYEKPDFITINRFRNRVKKEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVE RNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEHR DKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDFALFPNPTDTLTLIPFLQSFSN RYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTRN VKTASGYVSENARYRAVRCEGYPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKNN MNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKEGMNWLIRLFYELTTAVFRCWEHINQRNLQKIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65468; Mature: 65337
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIHFRPYNPNQTVLFPQRIDEDIAENDPVRMVDALVKGLNLESFRKLYKECGRSPYHP CCEEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH KMMLKVILYAYMNNIYSCRKIEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKKEINEVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHH TQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVERNRERLMKKIHILLGQIDN HHHHHHHCCCCEEEEEEEEECCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH VIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH HHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDF HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE ALFPNPTDTLTLIPFLQSFSNRYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFH EECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCEEEEEEEEEE MEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTRNVKTASGYVSENARYRAVRC ECCCCCCCCCCCCCCCCEECCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE EGYPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKN CCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHC NMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKEGMNWLIRLFYELTTAVFRCWEH CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INQRNLQKIAA HHHHHHHHHCC >Mature Secondary Structure TKIHFRPYNPNQTVLFPQRIDEDIAENDPVRMVDALVKGLNLESFRKLYKECGRSPYHP CEEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH KMMLKVILYAYMNNIYSCRKIEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKKEINEVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHH TQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVERNRERLMKKIHILLGQIDN HHHHHHHCCCCEEEEEEEEECCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH VIAQENSSESNEEIEFTPAMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH HHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTENQFITDF HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE ALFPNPTDTLTLIPFLQSFSNRYDRMAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFH EECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCEEEEEEEEEE MEQRPRFKPDPFKAENFYYNEEHDFCICPMGQRMRRIGTRNVKTASGYVSENARYRAVRC ECCCCCCCCCCCCCCCCEECCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE EGYPLRCRCFKAKGNRTIELNHRLRQYKRRAKELLCSEKGLKHRGQRCIEPEAVFGQIKN CCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHC NMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMCAKLTKEGMNWLIRLFYELTTAVFRCWEH CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INQRNLQKIAA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA