Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
---|---|
Accession | NC_009614 |
Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150005390
Identifier: 150005390
GI number: 150005390
Start: 3635813
End: 3636208
Strand: Reverse
Name: 150005390
Synonym: BVU_2870
Alternate gene names: NA
Gene position: 3636208-3635813 (Counterclockwise)
Preceding gene: 150005391
Following gene: 150005386
Centisome position: 70.43
GC content: 38.89
Gene sequence:
>396_bases ATGGATAATATACTCAAACAAATGATTGCAAATTATCCATTTATGGATTACTTTTGCAATACCAATCAATCAATAAACAA ATATATGAATAATAGTTCACATATCCAATCGAATAGTAATAAAAGTTGCGCAAAAAAACGCGACTATAGGTTAGTTGTGG ATGGCAAATATAACCGCAAAGCCATCATGCAGAGGGCATGGGCGTTCATGAAAGTTTATAAGGGATATACTTTGAAATCA GCCATACGACAAGCTTGGATAGACGCCATTCTTGCCATGGAAGACTATAACTACTCACAGAACATCAAGCCCCGCCTGCC AAAATCAGGACTCACGATGAAAAGCCTGTACGCCAACCCGACAGGTGACATGGCCAATGGATATGCAACCAGATAA
Upstream 100 bases:
>100_bases CATTTAATAGCAAAAGCTCTATCAGTTAGCTTATAATAATTGATAATAGACTTAATTCTTTCAACCATACCAATACAATC AATAGTTAATATATCCAAAT
Downstream 100 bases:
>100_bases TTCAATCATACCAATCAAATATCAATCATCATGGAAGAAGAATTAAGAAAACGAATTGAAGAACTTGAAGCCCAAAACAA GGAGCTGAAATTTCAAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MDNILKQMIANYPFMDYFCNTNQSINKYMNNSSHIQSNSNKSCAKKRDYRLVVDGKYNRKAIMQRAWAFMKVYKGYTLKS AIRQAWIDAILAMEDYNYSQNIKPRLPKSGLTMKSLYANPTGDMANGYATR
Sequences:
>Translated_131_residues MDNILKQMIANYPFMDYFCNTNQSINKYMNNSSHIQSNSNKSCAKKRDYRLVVDGKYNRKAIMQRAWAFMKVYKGYTLKS AIRQAWIDAILAMEDYNYSQNIKPRLPKSGLTMKSLYANPTGDMANGYATR >Mature_131_residues MDNILKQMIANYPFMDYFCNTNQSINKYMNNSSHIQSNSNKSCAKKRDYRLVVDGKYNRKAIMQRAWAFMKVYKGYTLKS AIRQAWIDAILAMEDYNYSQNIKPRLPKSGLTMKSLYANPTGDMANGYATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15223; Mature: 15223
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNILKQMIANYPFMDYFCNTNQSINKYMNNSSHIQSNSNKSCAKKRDYRLVVDGKYNRK CHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCHH AIMQRAWAFMKVYKGYTLKSAIRQAWIDAILAMEDYNYSQNIKPRLPKSGLTMKSLYANP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCC TGDMANGYATR CCCCCCCCCCC >Mature Secondary Structure MDNILKQMIANYPFMDYFCNTNQSINKYMNNSSHIQSNSNKSCAKKRDYRLVVDGKYNRK CHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCHH AIMQRAWAFMKVYKGYTLKSAIRQAWIDAILAMEDYNYSQNIKPRLPKSGLTMKSLYANP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCC TGDMANGYATR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA