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The map label for this gene is ssb [H]

Identifier: 150005383

GI number: 150005383

Start: 3630706

End: 3631083

Strand: Reverse

Name: ssb [H]

Synonym: BVU_2859

Alternate gene names: 150005383

Gene position: 3631083-3630706 (Counterclockwise)

Preceding gene: 150005384

Following gene: 150005382

Centisome position: 70.33

GC content: 48.68

Gene sequence:

>378_bases
ATGAGTGTGAATAAAGCAATCCTGTTAGGACATCTCGGAAAGGATCCCGATGTCAGATATCTTGAGGGCGGTGTCGCCGT
CGGCCAGTTCTCTCTTGCCACGACCAAGCGCGCACAGACTTTGCCAAATGGCACACAAATTCCCGAACGTACCGAATGGC
ATAATATCGTAGTATGGCGTGGTATTGCCGAAACAGCCAAGAAGTATCTTCATAAAGGGGATAAGGTATATGTCGAAGGC
GAAATCAGAAGCCGGTCGTTTGAAGACAAGAACGGTGTCAGGCATACTGTCGTTGAGACATTTGCAGAAAGCATGGAGAT
GGTAACTGTCAAGCAGCAGACACAACATGCCAGTTCCGATGATGAGTTGCCCTGCTGA

Upstream 100 bases:

>100_bases
AAGGCATTCCAGACTGACTATCCGGATTTGTATTCAAAGTATCTGAAATCTGTCGAAAAGAAAGCATCTATTCGTATAAC
CATAAGAAAGGAGAAAGAAA

Downstream 100 bases:

>100_bases
TGGAAGCCACTATTATAAAGAAAGACGGTAAAGCAACTCTTGACAAACCGTTTGAGTTCATGCTAAGCCTGCTGAGAAAT
GGGGAATATACCCTCACCAT

Product: single-strand DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSVNKAILLGHLGKDPDVRYLEGGVAVGQFSLATTKRAQTLPNGTQIPERTEWHNIVVWRGIAETAKKYLHKGDKVYVEG
EIRSRSFEDKNGVRHTVVETFAESMEMVTVKQQTQHASSDDELPC

Sequences:

>Translated_125_residues
MSVNKAILLGHLGKDPDVRYLEGGVAVGQFSLATTKRAQTLPNGTQIPERTEWHNIVVWRGIAETAKKYLHKGDKVYVEG
EIRSRSFEDKNGVRHTVVETFAESMEMVTVKQQTQHASSDDELPC
>Mature_124_residues
SVNKAILLGHLGKDPDVRYLEGGVAVGQFSLATTKRAQTLPNGTQIPERTEWHNIVVWRGIAETAKKYLHKGDKVYVEGE
IRSRSFEDKNGVRHTVVETFAESMEMVTVKQQTQHASSDDELPC

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=34.8623853211009, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790494, Length=113, Percent_Identity=42.4778761061947, Blast_Score=92, Evalue=9e-21,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 13995; Mature: 13864

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNKAILLGHLGKDPDVRYLEGGVAVGQFSLATTKRAQTLPNGTQIPERTEWHNIVVWR
CCCCCEEEEECCCCCCCCEEEECCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
GIAETAKKYLHKGDKVYVEGEIRSRSFEDKNGVRHTVVETFAESMEMVTVKQQTQHASSD
CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DELPC
CCCCC
>Mature Secondary Structure 
SVNKAILLGHLGKDPDVRYLEGGVAVGQFSLATTKRAQTLPNGTQIPERTEWHNIVVWR
CCCCEEEEECCCCCCCCEEEECCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
GIAETAKKYLHKGDKVYVEGEIRSRSFEDKNGVRHTVVETFAESMEMVTVKQQTQHASSD
CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DELPC
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]