Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005376
Identifier: 150005376
GI number: 150005376
Start: 3626211
End: 3626876
Strand: Reverse
Name: 150005376
Synonym: BVU_2852
Alternate gene names: NA
Gene position: 3626876-3626211 (Counterclockwise)
Preceding gene: 150005377
Following gene: 150005375
Centisome position: 70.24
GC content: 43.84
Gene sequence:
>666_bases ATGGGAACAATAGGAGCTGTTATACAAGCAAGCAGGAAGCTAACGCCTACGCTCTTAGCTTGCTACAACAACATAAGCGA GACCTCGAAGAAGGCTTGGCTGACCAAATGGAAAGACCGTTCTGAGGTTGAAAGAGTATTTTCACCAACTCAATGGGGAT ATACCCTTCAGAATCCGGAAAAGGCTTATATGGCAGACTGTCCCTCGCTGATGCAGTATGATGCGCTTTACGGCCATGGT TCCTCCGAATATTGGATTGACATACAGGTGTCTGGCATATTCGGGGCTTCCAACAGCAAGGAAAAGGGAGTTGCTGATGG AATAAGAATCTTCTGCCAGTCCTTTGCCTCACAGGTTAAGGCTTACAAACTTTCTGAGTTGATGTTGTTTTTCGCACGCT ACAAAGCTGGAAAGTATGATAATTCATTCGCCTCTTTCGATGCCAGAAGAATTGGCAATGCCTTTTTCAAGGAGTTCAGG TCAGAAAGGAATTATGAGCTGGACGCTATAAACCGAAAGAGAATCCAGAATGAGATAGAGAACAGAAGATTCACTCCACC CGAAGGATATTCTTCTTTGAGCTGGTACAACGAACTAAAACGCCGTGCGGAATCCGGTGATGCAGAATCCAAGCAAATAA TAGATTTATGGAAAAAATCAGAATAA
Upstream 100 bases:
>100_bases GAGAAACTTCAAAACGAGGGAGAGGTAAGGAAAGCACCAAAGGATGCGAAATCACACTTTGCTAGATGGCTGAAAATTGA GCTTGAAAAACAACGAAACA
Downstream 100 bases:
>100_bases AGTGGAGCTCCAAAGGCATGAAAAGACGTAAAGAGATATGTGAACGTTTCGGTTTCAGCTCATATCTTACCCTGAATCAT GAATCTGAGGTGTATGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MGTIGAVIQASRKLTPTLLACYNNISETSKKAWLTKWKDRSEVERVFSPTQWGYTLQNPEKAYMADCPSLMQYDALYGHG SSEYWIDIQVSGIFGASNSKEKGVADGIRIFCQSFASQVKAYKLSELMLFFARYKAGKYDNSFASFDARRIGNAFFKEFR SERNYELDAINRKRIQNEIENRRFTPPEGYSSLSWYNELKRRAESGDAESKQIIDLWKKSE
Sequences:
>Translated_221_residues MGTIGAVIQASRKLTPTLLACYNNISETSKKAWLTKWKDRSEVERVFSPTQWGYTLQNPEKAYMADCPSLMQYDALYGHG SSEYWIDIQVSGIFGASNSKEKGVADGIRIFCQSFASQVKAYKLSELMLFFARYKAGKYDNSFASFDARRIGNAFFKEFR SERNYELDAINRKRIQNEIENRRFTPPEGYSSLSWYNELKRRAESGDAESKQIIDLWKKSE >Mature_220_residues GTIGAVIQASRKLTPTLLACYNNISETSKKAWLTKWKDRSEVERVFSPTQWGYTLQNPEKAYMADCPSLMQYDALYGHGS SEYWIDIQVSGIFGASNSKEKGVADGIRIFCQSFASQVKAYKLSELMLFFARYKAGKYDNSFASFDARRIGNAFFKEFRS ERNYELDAINRKRIQNEIENRRFTPPEGYSSLSWYNELKRRAESGDAESKQIIDLWKKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25485; Mature: 25354
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTIGAVIQASRKLTPTLLACYNNISETSKKAWLTKWKDRSEVERVFSPTQWGYTLQNPE CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCC KAYMADCPSLMQYDALYGHGSSEYWIDIQVSGIFGASNSKEKGVADGIRIFCQSFASQVK HHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH AYKLSELMLFFARYKAGKYDNSFASFDARRIGNAFFKEFRSERNYELDAINRKRIQNEIE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NRRFTPPEGYSSLSWYNELKRRAESGDAESKQIIDLWKKSE CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure GTIGAVIQASRKLTPTLLACYNNISETSKKAWLTKWKDRSEVERVFSPTQWGYTLQNPE CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCC KAYMADCPSLMQYDALYGHGSSEYWIDIQVSGIFGASNSKEKGVADGIRIFCQSFASQVK HHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH AYKLSELMLFFARYKAGKYDNSFASFDARRIGNAFFKEFRSERNYELDAINRKRIQNEIE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NRRFTPPEGYSSLSWYNELKRRAESGDAESKQIIDLWKKSE CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA