Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005366
Identifier: 150005366
GI number: 150005366
Start: 3618221
End: 3618874
Strand: Reverse
Name: 150005366
Synonym: BVU_2842
Alternate gene names: NA
Gene position: 3618874-3618221 (Counterclockwise)
Preceding gene: 150005367
Following gene: 150005365
Centisome position: 70.09
GC content: 43.88
Gene sequence:
>654_bases ATGACAAAAAACATTTCTATAAAGCTGCTGGACTTCAACAAGGGCCAGCTCGCCGGGCTTCCGAAGAACCCACGTTTCTT CCGGGACTATCGCTTCGAAGCGATGAAAAAAAGTATTTCCGACTCTCCTGAGATGCTTGATCTCCGTGAACTTATCGTTT TTCCATCAGAAGGCAGATACATTGTCGTTTGTGGTAACCTGCGTTTACGTGCCTGTAAGGATTTGGGCTATAAAGAACTT CCCTGCAAGGTGCTGCCAGACGATACACCCGTAGCCAAGCTTCGTGAATACGCCACAAAAGATAATGTAAGTTTCGGTGA GAATGATATGGATATTATGGAAAACGAGTGGGATAAGGCTGAGTTACAGGACTGGGGTATTGAGTTCGCTCCAGAAAAGG AAAAGGATGAATTCAAGGATCGTTTCAACGCCATATCGGATGACAACGCCCTGTATCCTCTCATTCCCAAATATGATGAG AAACATGAACTATTCATCATTATTTCCGGTAATGAGGTGGACAGCAACTGGCTCCGTGAACGGTTGGATATGCAGCACAT GAAATCCTACAAGACCGGCAAGATAAGCAAATCGAATGTCATTGATATAAAAGATGTACGCCATGCCTTGCAAAATAGTA ATTCCAAGCCATAA
Upstream 100 bases:
>100_bases GATCAAGGATACGATAGAGTTCAATGACAACAAGGATGAATAGGTGTTGTGACTGACTTGAGTGATGTTGATTTTAAGTG TAGTTGATAAATAGTGAGTT
Downstream 100 bases:
>100_bases AAGGCATGACAGAGTGTTCGCCAAAAAGCTGGTGAATGATCCCATTGTCTGTGTGGCCGAGAGCCAAGCAGACCTGTATC GTGAATTTAACCCGGATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTKNISIKLLDFNKGQLAGLPKNPRFFRDYRFEAMKKSISDSPEMLDLRELIVFPSEGRYIVVCGNLRLRACKDLGYKEL PCKVLPDDTPVAKLREYATKDNVSFGENDMDIMENEWDKAELQDWGIEFAPEKEKDEFKDRFNAISDDNALYPLIPKYDE KHELFIIISGNEVDSNWLRERLDMQHMKSYKTGKISKSNVIDIKDVRHALQNSNSKP
Sequences:
>Translated_217_residues MTKNISIKLLDFNKGQLAGLPKNPRFFRDYRFEAMKKSISDSPEMLDLRELIVFPSEGRYIVVCGNLRLRACKDLGYKEL PCKVLPDDTPVAKLREYATKDNVSFGENDMDIMENEWDKAELQDWGIEFAPEKEKDEFKDRFNAISDDNALYPLIPKYDE KHELFIIISGNEVDSNWLRERLDMQHMKSYKTGKISKSNVIDIKDVRHALQNSNSKP >Mature_216_residues TKNISIKLLDFNKGQLAGLPKNPRFFRDYRFEAMKKSISDSPEMLDLRELIVFPSEGRYIVVCGNLRLRACKDLGYKELP CKVLPDDTPVAKLREYATKDNVSFGENDMDIMENEWDKAELQDWGIEFAPEKEKDEFKDRFNAISDDNALYPLIPKYDEK HELFIIISGNEVDSNWLRERLDMQHMKSYKTGKISKSNVIDIKDVRHALQNSNSKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25272; Mature: 25141
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNISIKLLDFNKGQLAGLPKNPRFFRDYRFEAMKKSISDSPEMLDLRELIVFPSEGRY CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCE IVVCGNLRLRACKDLGYKELPCKVLPDDTPVAKLREYATKDNVSFGENDMDIMENEWDKA EEEECCCEEEHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCHH ELQDWGIEFAPEKEKDEFKDRFNAISDDNALYPLIPKYDEKHELFIIISGNEVDSNWLRE HHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCHHHHHH RLDMQHMKSYKTGKISKSNVIDIKDVRHALQNSNSKP HHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCCCCC >Mature Secondary Structure TKNISIKLLDFNKGQLAGLPKNPRFFRDYRFEAMKKSISDSPEMLDLRELIVFPSEGRY CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCE IVVCGNLRLRACKDLGYKELPCKVLPDDTPVAKLREYATKDNVSFGENDMDIMENEWDKA EEEECCCEEEHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCHH ELQDWGIEFAPEKEKDEFKDRFNAISDDNALYPLIPKYDEKHELFIIISGNEVDSNWLRE HHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCHHHHHH RLDMQHMKSYKTGKISKSNVIDIKDVRHALQNSNSKP HHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA