BacMap

Definition	Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession	NC_009614
Length	5,163,189

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The map label for this gene is cbpA [H]

Identifier: 150005252

GI number: 150005252

Start: 3468407

End: 3469378

Strand: Reverse

Name: cbpA [H]

Synonym: BVU_2724

Alternate gene names: 150005252

Gene position: 3469378-3468407 (Counterclockwise)

Preceding gene: 150005257

Following gene: 150005251

Centisome position: 67.19

GC content: 47.02

Gene sequence:

>972_bases
ATGGCTTACATAGACTATTACAAAGTATTGGGAGTGGACAAAAGCGCCACCCAAGATGATATCAAGAAGGCTTTCCGTAA
GCTGGCCCGCAAATACCATCCTGACTTGAATCCGAATGATCCTGGAGCCAAAGATAAGTTTCAGGAGATAAATGAAGCCA
ACGAAGTACTGAGTGACCCGGAAAAACGTAAGAAATACGACGAATACGGGGAACACTGGAAACATGCCGACGAATTTGAA
AAACAAAAGCAACAATATGGAGGTGCTGGTGGATTCGGAGGGTTTGGCGGAGCCGGAAGCGGATTCGGTACGGACGGTAA
CGGCAGTTACTGGTATTCCGGCAATGGAGGAGAAGAATTCACCGGTGCACATTTCGGTGGCAGCGCAGGTGGTTTCTCTG
ATTTCTTTGAAGAACTGTTCGGGCATCGTGGCGGTGCAAACGGCGGACGAAGCGCCGGATTCCGTGGACAGGACTATAAT
GCTGAATTACAACTTTCATTGCGTGAAGCCGCCGAAACACACAAACAAGTGCTTAATGTAAACGGAAAGAACATACGTAT
CACTGTTCCGGCAGGTATAGCCAACGGACAGACTATCAAATTGCGTGGTCATGGTGCACCGGGGGTAAACGGTGGTCCTG
CAGGCGATCTGTACATCACCTTTGTCATTCCAGACGATCCTGTATTCAAACGTTTGGGAAATGATTTATATATCCATGCT
CCGCTTAGCCTCTACACCGCCGTACTGGGTGGTGAAGAAACCGTGGACACACTGAACGGCAAGGTAAAACTGAAAGTAAA
ACCTGAAACCCAGAACGGAACCAAAGTCCGTTTGAAAGGCAAAGGCTTTCCTGTTTACAAGGAAGAAGGCAAATTTGGCG
ATCTGATAGTAACTTATAATGTCACCATTCCTAGCAACCTGACCGAACATCAGAAAGAGCTGTTCCGCCAATTAAAAGAT
AGTAGCAATTAA

Upstream 100 bases:

>100_bases
TAAAAATTCGCTGCAAAGATAATAAAATAAAAACAGAACACAACCAATTGGCATGTATTTTGTTTCTCTTAAAGCAGATG
AAATTTAACAAATATATAAT

Downstream 100 bases:

>100_bases
AAAAAGAGAAGGATTATGCAGACCGATTTAATTATTATCAACGATTTTTGCGACCGTTGCCATGTGGACCCGTCGTTCAT
TATGGAACTGGAAGAAGACG

Product: putative chaperone DnAJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MAYIDYYKVLGVDKSATQDDIKKAFRKLARKYHPDLNPNDPGAKDKFQEINEANEVLSDPEKRKKYDEYGEHWKHADEFE
KQKQQYGGAGGFGGFGGAGSGFGTDGNGSYWYSGNGGEEFTGAHFGGSAGGFSDFFEELFGHRGGANGGRSAGFRGQDYN
AELQLSLREAAETHKQVLNVNGKNIRITVPAGIANGQTIKLRGHGAPGVNGGPAGDLYITFVIPDDPVFKRLGNDLYIHA
PLSLYTAVLGGEETVDTLNGKVKLKVKPETQNGTKVRLKGKGFPVYKEEGKFGDLIVTYNVTIPSNLTEHQKELFRQLKD
SSN

Sequences:

>Translated_323_residues
MAYIDYYKVLGVDKSATQDDIKKAFRKLARKYHPDLNPNDPGAKDKFQEINEANEVLSDPEKRKKYDEYGEHWKHADEFE
KQKQQYGGAGGFGGFGGAGSGFGTDGNGSYWYSGNGGEEFTGAHFGGSAGGFSDFFEELFGHRGGANGGRSAGFRGQDYN
AELQLSLREAAETHKQVLNVNGKNIRITVPAGIANGQTIKLRGHGAPGVNGGPAGDLYITFVIPDDPVFKRLGNDLYIHA
PLSLYTAVLGGEETVDTLNGKVKLKVKPETQNGTKVRLKGKGFPVYKEEGKFGDLIVTYNVTIPSNLTEHQKELFRQLKD
SSN
>Mature_322_residues
AYIDYYKVLGVDKSATQDDIKKAFRKLARKYHPDLNPNDPGAKDKFQEINEANEVLSDPEKRKKYDEYGEHWKHADEFEK
QKQQYGGAGGFGGFGGAGSGFGTDGNGSYWYSGNGGEEFTGAHFGGSAGGFSDFFEELFGHRGGANGGRSAGFRGQDYNA
ELQLSLREAAETHKQVLNVNGKNIRITVPAGIANGQTIKLRGHGAPGVNGGPAGDLYITFVIPDDPVFKRLGNDLYIHAP
LSLYTAVLGGEETVDTLNGKVKLKVKPETQNGTKVRLKGKGFPVYKEEGKFGDLIVTYNVTIPSNLTEHQKELFRQLKDS
SN

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI7706495, Length=322, Percent_Identity=33.8509316770186, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI205360840, Length=359, Percent_Identity=30.3621169916435, Blast_Score=137, Evalue=9e-33,
Organism=Homo sapiens, GI6631085, Length=348, Percent_Identity=31.0344827586207, Blast_Score=131, Evalue=7e-31,
Organism=Homo sapiens, GI201862518, Length=356, Percent_Identity=31.1797752808989, Blast_Score=131, Evalue=8e-31,
Organism=Homo sapiens, GI56549115, Length=356, Percent_Identity=31.1797752808989, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI201862587, Length=356, Percent_Identity=31.1797752808989, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI5453690, Length=359, Percent_Identity=31.1977715877437, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI39204547, Length=336, Percent_Identity=29.4642857142857, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI4504511, Length=333, Percent_Identity=28.2282282282282, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI194328760, Length=331, Percent_Identity=27.4924471299094, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI194328758, Length=331, Percent_Identity=27.4924471299094, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI205360838, Length=70, Percent_Identity=58.5714285714286, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=64.0625, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI56687498, Length=67, Percent_Identity=59.7014925373134, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI24308127, Length=67, Percent_Identity=56.7164179104478, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI29126218, Length=64, Percent_Identity=54.6875, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4885495, Length=67, Percent_Identity=58.2089552238806, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI5031741, Length=72, Percent_Identity=55.5555555555556, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI194306642, Length=67, Percent_Identity=53.7313432835821, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI194306640, Length=67, Percent_Identity=53.7313432835821, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI17388799, Length=67, Percent_Identity=58.2089552238806, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI9558755, Length=70, Percent_Identity=57.1428571428571, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI21553335, Length=68, Percent_Identity=55.8823529411765, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI47777312, Length=69, Percent_Identity=55.0724637681159, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI72534740, Length=66, Percent_Identity=59.0909090909091, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI23503241, Length=72, Percent_Identity=54.1666666666667, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI22749377, Length=67, Percent_Identity=53.7313432835821, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI88501736, Length=66, Percent_Identity=56.0606060606061, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI27151736, Length=66, Percent_Identity=56.0606060606061, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI5453980, Length=107, Percent_Identity=42.9906542056075, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1787235, Length=337, Percent_Identity=32.6409495548961, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1786197, Length=139, Percent_Identity=43.1654676258993, Blast_Score=119, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17534355, Length=341, Percent_Identity=34.0175953079179, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17554644, Length=102, Percent_Identity=45.0980392156863, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI212645553, Length=67, Percent_Identity=56.7164179104478, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI115532378, Length=67, Percent_Identity=56.7164179104478, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17568643, Length=66, Percent_Identity=60.6060606060606, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17553096, Length=63, Percent_Identity=60.3174603174603, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17553098, Length=63, Percent_Identity=60.3174603174603, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17538236, Length=66, Percent_Identity=50, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI115532476, Length=66, Percent_Identity=48.4848484848485, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17554900, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17563890, Length=64, Percent_Identity=54.6875, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17507263, Length=63, Percent_Identity=52.3809523809524, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=340, Percent_Identity=29.4117647058824, Blast_Score=104, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6323870, Length=66, Percent_Identity=54.5454545454545, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6322194, Length=66, Percent_Identity=53.030303030303, Blast_Score=76, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6323813, Length=150, Percent_Identity=40, Blast_Score=76, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6320888, Length=66, Percent_Identity=51.5151515151515, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6324321, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323119, Length=91, Percent_Identity=46.1538461538462, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324103, Length=68, Percent_Identity=50, Blast_Score=63, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322388, Length=68, Percent_Identity=50, Blast_Score=63, Evalue=8e-11,
Organism=Drosophila melanogaster, GI85726398, Length=371, Percent_Identity=30.188679245283, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI24658562, Length=353, Percent_Identity=33.1444759206799, Blast_Score=134, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24658555, Length=353, Percent_Identity=33.1444759206799, Blast_Score=134, Evalue=6e-32,
Organism=Drosophila melanogaster, GI19920464, Length=330, Percent_Identity=29.6969696969697, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI45549272, Length=67, Percent_Identity=61.1940298507463, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI18858081, Length=344, Percent_Identity=26.453488372093, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI45552813, Length=67, Percent_Identity=61.1940298507463, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45552811, Length=67, Percent_Identity=61.1940298507463, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24654066, Length=69, Percent_Identity=57.9710144927536, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24654070, Length=69, Percent_Identity=57.9710144927536, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24654068, Length=69, Percent_Identity=57.9710144927536, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24654072, Length=69, Percent_Identity=57.9710144927536, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17737735, Length=64, Percent_Identity=59.375, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574723, Length=64, Percent_Identity=59.375, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24668523, Length=64, Percent_Identity=59.375, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI161077138, Length=65, Percent_Identity=56.9230769230769, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646562, Length=66, Percent_Identity=59.0909090909091, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646560, Length=66, Percent_Identity=59.0909090909091, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646558, Length=66, Percent_Identity=59.0909090909091, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646556, Length=66, Percent_Identity=59.0909090909091, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357547, Length=66, Percent_Identity=59.0909090909091, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI20129487, Length=70, Percent_Identity=55.7142857142857, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24584014, Length=70, Percent_Identity=55.7142857142857, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24668492, Length=74, Percent_Identity=45.945945945946, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21358273, Length=66, Percent_Identity=56.0606060606061, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574949, Length=144, Percent_Identity=31.25, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355911, Length=94, Percent_Identity=44.6808510638298, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24641698, Length=63, Percent_Identity=49.2063492063492, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641696, Length=63, Percent_Identity=49.2063492063492, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24651436, Length=172, Percent_Identity=29.0697674418605, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24762799, Length=103, Percent_Identity=38.8349514563107, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21357687, Length=65, Percent_Identity=50.7692307692308, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 35208; Mature: 35077

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIDYYKVLGVDKSATQDDIKKAFRKLARKYHPDLNPNDPGAKDKFQEINEANEVLSDP
CCEEEEEHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCH
EKRKKYDEYGEHWKHADEFEKQKQQYGGAGGFGGFGGAGSGFGTDGNGSYWYSGNGGEEF
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
TGAHFGGSAGGFSDFFEELFGHRGGANGGRSAGFRGQDYNAELQLSLREAAETHKQVLNV
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCC
NGKNIRITVPAGIANGQTIKLRGHGAPGVNGGPAGDLYITFVIPDDPVFKRLGNDLYIHA
CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCEEEEC
PLSLYTAVLGGEETVDTLNGKVKLKVKPETQNGTKVRLKGKGFPVYKEEGKFGDLIVTYN
HHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE
VTIPSNLTEHQKELFRQLKDSSN
EECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AYIDYYKVLGVDKSATQDDIKKAFRKLARKYHPDLNPNDPGAKDKFQEINEANEVLSDP
CEEEEEHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCH
EKRKKYDEYGEHWKHADEFEKQKQQYGGAGGFGGFGGAGSGFGTDGNGSYWYSGNGGEEF
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
TGAHFGGSAGGFSDFFEELFGHRGGANGGRSAGFRGQDYNAELQLSLREAAETHKQVLNV
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCC
NGKNIRITVPAGIANGQTIKLRGHGAPGVNGGPAGDLYITFVIPDDPVFKRLGNDLYIHA
CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCEEEEC
PLSLYTAVLGGEETVDTLNGKVKLKVKPETQNGTKVRLKGKGFPVYKEEGKFGDLIVTYN
HHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE
VTIPSNLTEHQKELFRQLKDSSN
EECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA