Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005245
Identifier: 150005245
GI number: 150005245
Start: 3460563
End: 3460994
Strand: Reverse
Name: 150005245
Synonym: BVU_2717
Alternate gene names: NA
Gene position: 3460994-3460563 (Counterclockwise)
Preceding gene: 150005247
Following gene: 150005231
Centisome position: 67.03
GC content: 41.67
Gene sequence:
>432_bases ATGAAAAATCCTCCCCCAGCCTGTCCGGAAACGGTTTCCTGCTTTCCTTTTACTCTGTCATTCCAGCGTAACAAGACTCT TTCAAGGAATCGGCGAAGTAAACCAAGAAGTCAAACAAATCTATTTATCGAATATACCATCTTTCGCACTGGCTGTAGAC GGCACCCCAACATAACCTCCCAAATTACAATTAGAAACCCCAATTGTCTTCGTATTCGAGAAACCAAGACCTATCCCTGC TTTATCCACATCCACGTTATCAAAAGTCACGTTATAAATAGGCTTCTCCTCTGTACCTTGAAGCACCAATGCAGCTACAT TCACCTTTTTGCATTTCAAATCCTTTACATAAATATCATGCACCTCAGTAAAATGATGGTTATCCATCCCCTCGCCTGCA TACATGGAAGTTACGCGTACAAAAAGGGTTAA
Upstream 100 bases:
>100_bases TTAATCCAAGTCAATAAAATTCGGGCAAATTCGTTTGTACTCATAATTATCGTCTTTTTACTTATAGAACCATCTATAAA AACATTTGTTTAGCTGAGGG
Downstream 100 bases:
>100_bases CATGACTTTTTAACCGGTTCAATCTTTCCGCTGCCATGAAGCCCAAAGGGCGGAGAAACTGAGAAAAAGTAATAGCCCGC CAGCGGAATTAAACAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKNPPPACPETVSCFPFTLSFQRNKTLSRNRRSKPRSQTNLFIEYTIFRTGCRRHPNITSQITIRNPNCLRIRETKTYPC FIHIHVIKSHVINRLLLCTLKHQCSYIHLFAFQILYINIMHLSKMMVIHPLACIHGSYAYKKG
Sequences:
>Translated_143_residues MKNPPPACPETVSCFPFTLSFQRNKTLSRNRRSKPRSQTNLFIEYTIFRTGCRRHPNITSQITIRNPNCLRIRETKTYPC FIHIHVIKSHVINRLLLCTLKHQCSYIHLFAFQILYINIMHLSKMMVIHPLACIHGSYAYKKG >Mature_143_residues MKNPPPACPETVSCFPFTLSFQRNKTLSRNRRSKPRSQTNLFIEYTIFRTGCRRHPNITSQITIRNPNCLRIRETKTYPC FIHIHVIKSHVINRLLLCTLKHQCSYIHLFAFQILYINIMHLSKMMVIHPLACIHGSYAYKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16816; Mature: 16816
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPPPACPETVSCFPFTLSFQRNKTLSRNRRSKPRSQTNLFIEYTIFRTGCRRHPNITS CCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCE QITIRNPNCLRIRETKTYPCFIHIHVIKSHVINRLLLCTLKHQCSYIHLFAFQILYINIM EEEEECCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HLSKMMVIHPLACIHGSYAYKKG HHHHHHHHHHHHHHCCCCEECCC >Mature Secondary Structure MKNPPPACPETVSCFPFTLSFQRNKTLSRNRRSKPRSQTNLFIEYTIFRTGCRRHPNITS CCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCE QITIRNPNCLRIRETKTYPCFIHIHVIKSHVINRLLLCTLKHQCSYIHLFAFQILYINIM EEEEECCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HLSKMMVIHPLACIHGSYAYKKG HHHHHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA