Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
---|---|
Accession | NC_009614 |
Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is kdgK [H]
Identifier: 150005189
GI number: 150005189
Start: 3377178
End: 3378230
Strand: Reverse
Name: kdgK [H]
Synonym: BVU_2659
Alternate gene names: 150005189
Gene position: 3378230-3377178 (Counterclockwise)
Preceding gene: 150005190
Following gene: 150005188
Centisome position: 65.43
GC content: 34.19
Gene sequence:
>1053_bases ATGGAAAAAAATAATATGGCAAAAGTTGTAACATTTGGAGAAATCATGGTGCGCCTTGCCGCACCGGAATATTTAAAGCT AATACAAACAAATGCATTTGAAATTAGTTACGCTGGCGCTGAAGCAAATGTAGCAGTCAGCCTAGCCCATTATGGAATAC AAACCGATTATATAACATGCTTACCCAATAATCCAATTGCAGAAAGGTGTATAATGGAATTGCGTGGACACAATGTTGGT GTAAATCATATTATTCGTAATGGAAAACGTATGGGAATATTATATCTTGAAAATGGAAGCAATACACGCCCATCTAAAGT ATATTATGATCGTGAAAATTCATCATTTGCAACAATACAGCAAAATAGTTTTAACTGGGATGACATATTACATGATGCTA ATTGGTTCCATTGGACAGGAATAACTCCAGCTTTATCAGAAAATGCTGCATCAGAATGTTTGAAAGCCATAAGAACTGCA AATAAGTTAGGAATAACAGTGAGTTGCGACATCAATTACAGAGATAATCTTTGGAAATATGGGAAAACAGCTCAGGAAAT AATGCCAGATATGGTTGCAGGAAGCGACATAATTCTTGGAAATGAAGAAGATTGCGAAAAAGTATTTGGAATAAAGCCAC AAAATTTTAATGCAGAACATACTCAAGGAAATGTAGACCAAAACACATTTATTGATGTTTGTGATCAAATGATGAAAATG TTCCCTCGATGTAAAAAAGTAGCAATTACGCTTCGTGGTGCTATAAATGCCAATCATAATACATGGGGTGGAGTCCTTTA TGATGGCAATAAACTTTTAAAAAGCAAACGTTATAATATTACAGATATTGTAGATCGTGTTGGAAGTGGAGATAGTTTCA TGGGAGGGCTAATATTTGGTATTATGCACTATGGAAATGATGAAAAAGCATTGGAATTTGCTGTAGCTGCTAGTTGTTTG AAACATACTATAAAAGGTGATTTCAATTGGTCTTCAATAGAAGATGTAAAAAATTTAATAAAAGGAGATGTCAGTGGACG TGTAAAAAGATAA
Upstream 100 bases:
>100_bases GGTCAAAAACCTCTTTTGCATGTAATGGATAAACTTCACAGTTTAGATATTGATTGGCCCGATGATTTTATAATCGCCGA AATAATGTATAATAATCTTT
Downstream 100 bases:
>100_bases AACAGATATGAATTTTTGGGAACTTATGATAAAAAAAGACGATATTATATTATCGTTTATAGAAGGAATTCGTAAACTTA TCTATGCTACAGATAGACAA
Product: putative gluconate kinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MEKNNMAKVVTFGEIMVRLAAPEYLKLIQTNAFEISYAGAEANVAVSLAHYGIQTDYITCLPNNPIAERCIMELRGHNVG VNHIIRNGKRMGILYLENGSNTRPSKVYYDRENSSFATIQQNSFNWDDILHDANWFHWTGITPALSENAASECLKAIRTA NKLGITVSCDINYRDNLWKYGKTAQEIMPDMVAGSDIILGNEEDCEKVFGIKPQNFNAEHTQGNVDQNTFIDVCDQMMKM FPRCKKVAITLRGAINANHNTWGGVLYDGNKLLKSKRYNITDIVDRVGSGDSFMGGLIFGIMHYGNDEKALEFAVAASCL KHTIKGDFNWSSIEDVKNLIKGDVSGRVKR
Sequences:
>Translated_350_residues MEKNNMAKVVTFGEIMVRLAAPEYLKLIQTNAFEISYAGAEANVAVSLAHYGIQTDYITCLPNNPIAERCIMELRGHNVG VNHIIRNGKRMGILYLENGSNTRPSKVYYDRENSSFATIQQNSFNWDDILHDANWFHWTGITPALSENAASECLKAIRTA NKLGITVSCDINYRDNLWKYGKTAQEIMPDMVAGSDIILGNEEDCEKVFGIKPQNFNAEHTQGNVDQNTFIDVCDQMMKM FPRCKKVAITLRGAINANHNTWGGVLYDGNKLLKSKRYNITDIVDRVGSGDSFMGGLIFGIMHYGNDEKALEFAVAASCL KHTIKGDFNWSSIEDVKNLIKGDVSGRVKR >Mature_350_residues MEKNNMAKVVTFGEIMVRLAAPEYLKLIQTNAFEISYAGAEANVAVSLAHYGIQTDYITCLPNNPIAERCIMELRGHNVG VNHIIRNGKRMGILYLENGSNTRPSKVYYDRENSSFATIQQNSFNWDDILHDANWFHWTGITPALSENAASECLKAIRTA NKLGITVSCDINYRDNLWKYGKTAQEIMPDMVAGSDIILGNEEDCEKVFGIKPQNFNAEHTQGNVDQNTFIDVCDQMMKM FPRCKKVAITLRGAINANHNTWGGVLYDGNKLLKSKRYNITDIVDRVGSGDSFMGGLIFGIMHYGNDEKALEFAVAASCL KHTIKGDFNWSSIEDVKNLIKGDVSGRVKR
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 39152; Mature: 39152
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNNMAKVVTFGEIMVRLAAPEYLKLIQTNAFEISYAGAEANVAVSLAHYGIQTDYITC CCCCCEEEEEEHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCEEEE LPNNPIAERCIMELRGHNVGVNHIIRNGKRMGILYLENGSNTRPSKVYYDRENSSFATIQ CCCCHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEEE QNSFNWDDILHDANWFHWTGITPALSENAASECLKAIRTANKLGITVSCDINYRDNLWKY CCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHH GKTAQEIMPDMVAGSDIILGNEEDCEKVFGIKPQNFNAEHTQGNVDQNTFIDVCDQMMKM CCCHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FPRCKKVAITLRGAINANHNTWGGVLYDGNKLLKSKRYNITDIVDRVGSGDSFMGGLIFG HHHHHEEEEEEEEEECCCCCCCCCEEECCHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHH IMHYGNDEKALEFAVAASCLKHTIKGDFNWSSIEDVKNLIKGDVSGRVKR HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEKNNMAKVVTFGEIMVRLAAPEYLKLIQTNAFEISYAGAEANVAVSLAHYGIQTDYITC CCCCCEEEEEEHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCEEEE LPNNPIAERCIMELRGHNVGVNHIIRNGKRMGILYLENGSNTRPSKVYYDRENSSFATIQ CCCCHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEEE QNSFNWDDILHDANWFHWTGITPALSENAASECLKAIRTANKLGITVSCDINYRDNLWKY CCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHH GKTAQEIMPDMVAGSDIILGNEEDCEKVFGIKPQNFNAEHTQGNVDQNTFIDVCDQMMKM CCCHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FPRCKKVAITLRGAINANHNTWGGVLYDGNKLLKSKRYNITDIVDRVGSGDSFMGGLIFG HHHHHEEEEEEEEEECCCCCCCCCEEECCHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHH IMHYGNDEKALEFAVAASCLKHTIKGDFNWSSIEDVKNLIKGDVSGRVKR HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]