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The map label for this gene is omp26 [H]

Identifier: 148828094

GI number: 148828094

Start: 1502029

End: 1502622

Strand: Reverse

Name: omp26 [H]

Synonym: CGSHiGG_08140

Alternate gene names: 148828094

Gene position: 1502622-1502029 (Counterclockwise)

Preceding gene: 148828095

Following gene: 148828093

Centisome position: 79.62

GC content: 35.02

Gene sequence:

>594_bases
ATGAAAAACATCGCAAAAGTAACCGCACTTGCTTTAGGTATTGCACTTGCTTCAGGCTATGCTTCCGCTGAAGAAAAAAT
TGCTTTCATTAATGCAGGTTATATTTTTCAACATCACCCAGATCGCCAAGCGGTAGCAGATAAACTTGATGCTGAATTTA
AACCTGTAGCTGAGAAATTAGCAGCAAGCAAAAAAGAAGTTGATGATAAAATTGCTGCTGCTCGTAAAAAAGTAGAAGCA
AAAGTTGCGGCTTTAGAAAAAGATGCACCTCGCTTACGTCAAGCTGATATTCAAAAACGCCAACAGGAAATTAATAAATT
AGGTGCGGCTGAAGATGCTGAATTACAAAAATTAATGCAAGAACAAGATAAAAAAGTTCAAGAATTCCAAGCTCAAAATG
AAAAACGTCAAGCTGAAGAACGTGGTAAATTATTAAATAGCATTCAAACTGCGACAAATAATTTAGCAAAAGCAAAAGGT
TATACTTATGTGCTTGATGCAAATTCAGTTGTATTTGCGGTAGAGGGTAAAGATATTACTGAAGAAGTATTAAAATCTAT
CCCTGCTTCTGAAAAAGCACAAGAGAAAAAATAA

Upstream 100 bases:

>100_bases
AACTTTTTTCTTCATCAGAACTCAAAAACAACGTTCTCTGCCTAATTTAATTGGGCAGAGAAAATATTAAACCCATCATT
TAATTAAGGATATTTATCAA

Downstream 100 bases:

>100_bases
TAGGTTCTCATAATGCAAAAATCCTATTCTTTACAAGAATTGGCAACTCAAATCGGCGCTACCGTTCGCGGTAACGCCGA
TGTTGTTGTTGAGAATATCG

Product: Outer membrane protein 26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKLAASKKEVDDKIAAARKKVEA
KVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQEQDKKVQEFQAQNEKRQAEERGKLLNSIQTATNNLAKAKG
YTYVLDANSVVFAVEGKDITEEVLKSIPASEKAQEKK

Sequences:

>Translated_197_residues
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKLAASKKEVDDKIAAARKKVEA
KVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQEQDKKVQEFQAQNEKRQAEERGKLLNSIQTATNNLAKAKG
YTYVLDANSVVFAVEGKDITEEVLKSIPASEKAQEKK
>Mature_197_residues
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKLAASKKEVDDKIAAARKKVEA
KVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQEQDKKVQEFQAQNEKRQAEERGKLLNSIQTATNNLAKAKG
YTYVLDANSVVFAVEGKDITEEVLKSIPASEKAQEKK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

Organism=Escherichia coli, GI1786375, Length=173, Percent_Identity=32.3699421965318, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 21703; Mature: 21703

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKL
CCHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCEEEEECCCHHHHHHHHCCHHHHHHHHH
AASKKEVDDKIAAARKKVEAKVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EQDKKVQEFQAQNEKRQAEERGKLLNSIQTATNNLAKAKGYTYVLDANSVVFAVEGKDIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHH
EEVLKSIPASEKAQEKK
HHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKL
CCHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCEEEEECCCHHHHHHHHCCHHHHHHHHH
AASKKEVDDKIAAARKKVEAKVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EQDKKVQEFQAQNEKRQAEERGKLLNSIQTATNNLAKAKGYTYVLDANSVVFAVEGKDIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHH
EEVLKSIPASEKAQEKK
HHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 10085039; 10675023 [H]