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The map label for this gene is yifE [C]

Identifier: 148828031

GI number: 148828031

Start: 1424469

End: 1424762

Strand: Direct

Name: yifE [C]

Synonym: CGSHiGG_07740

Alternate gene names: 148828031

Gene position: 1424469-1424762 (Clockwise)

Preceding gene: 148828030

Following gene: 148828032

Centisome position: 75.48

GC content: 41.5

Gene sequence:

>294_bases
ATGGCTGCAAGTTTTAGCGTAACGCGTCGTTTCTTTGACGACAAAAACTACCCACGTGGTTTTTCCCGTCACGGTGATTA
CACAATTAAAGAATCACAGGTGCTTGAGCAATATGGTCAAGCGTTCAAAGCATTAGACTTAGGGGAACGTGAGCCAGCGA
CTAAAGAAGAAAAAGATTTCGTCGCATTTTGCCGTGGTGAGCGTGCAGCAGAGACTTTCTTTGAAAAAACTTGGAATAAA
TATCGTACTCGTATTAACACTAAAAACGTGTTTACACCTTATCTAGTGATGTGA

Upstream 100 bases:

>100_bases
GATTATGTGCAAACCGTAAAAGGTTTATTGCAAAAATAACGAAAAATTGGTTTAATGCCAGCCCTATTTTGTAAATATTA
ATGAAAGAAGAGAGAATATT

Downstream 100 bases:

>100_bases
GTGAAGCTGCCTCTGGCGGTGAAGATTATTCCGGCGAATAAGATACGTTAAATAAGGCAGGCGGAAGTCTGCCTTTTGTT
TTTGAATAGCTTGTGAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MAASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDFVAFCRGERAAETFFEKTWNK
YRTRINTKNVFTPYLVM

Sequences:

>Translated_97_residues
MAASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDFVAFCRGERAAETFFEKTWNK
YRTRINTKNVFTPYLVM
>Mature_96_residues
AASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDFVAFCRGERAAETFFEKTWNKY
RTRINTKNVFTPYLVM

Specific function: Not known, a mutation in ORF3 causes a slight decrease in transformation efficiency [H]

COG id: COG3085

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0438 family [H]

Homologues:

Organism=Escherichia coli, GI2367277, Length=85, Percent_Identity=65.8823529411765, Blast_Score=120, Evalue=2e-29,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007335 [H]

Pfam domain/function: PF04219 DUF413 [H]

EC number: NA

Molecular weight: Translated: 11481; Mature: 11350

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDF
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VAFCRGERAAETFFEKTWNKYRTRINTKNVFTPYLVM
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECC
>Mature Secondary Structure 
AASFSVTRRFFDDKNYPRGFSRHGDYTIKESQVLEQYGQAFKALDLGEREPATKEEKDF
CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VAFCRGERAAETFFEKTWNKYRTRINTKNVFTPYLVM
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1438213; 7542800; 10675023 [H]