Definition | Haemophilus influenzae PittGG chromosome, complete genome. |
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Accession | NC_009567 |
Length | 1,887,192 |
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The map label for this gene is alaS [H]
Identifier: 148828002
GI number: 148828002
Start: 1393563
End: 1396187
Strand: Reverse
Name: alaS [H]
Synonym: CGSHiGG_07565
Alternate gene names: 148828002
Gene position: 1396187-1393563 (Counterclockwise)
Preceding gene: 148828003
Following gene: 148828001
Centisome position: 73.98
GC content: 40.91
Gene sequence:
>2625_bases ATGAAAACAACAGCAGAAATAAGACAATCATTCCTTGATTTTTTCCATAGCAAAGGTCACCAAGTAGTTGAGAGTAGCTC ACTTGTGCCGGAAAATGATCCGACTTTGCTTTTCACGAACGCGGGGATGAACCAATTTAAGGACGTGTTCCTTGGAATGG ATAAACGCCCTTATTCTAGAGCCACCACCGCGCAACGTTGCGTACGTGCTGGTGGTAAGCATAACGACTTAGAAAATGTT GGTTATACTGCGCGTCACCATACTTTCTTTGAAATGCTCGGTAACTTCAGTTTTGGCGATTACTTTAAACAGGATGCGAT TAATTTTGCTTGGGAATATTTAACTTCTCCACAATGGCTTGGTTTACCTAAAGAAAAACTCTGGGTAACCGTGTATGAAA CTGACGACGAAGCCTATAATATTTGGAATAAAGAAGTCGGTGTTCCTGCTGAACGCATTATTCGCATTGGTGACAATAAA GGCTCACCTTACGCATCAGACAACTTCTGGGCAATGGGCGACACAGGTCCTTGCGGTCCTTGTACTGAAATTTTCTACGA TCACGGCGATCATATTTGGGGCGGACCTCCAGGCTCACCAGAAGAAGATGGTGACCGTTATATTGAAATCTGGAACGTTG TGTTTATGCAGTTCAACCGTTTAGCAGATGGCACAATGGAAAAATTACCTCGTCCGTCTGTTGATACAGGTATGGGTTTA GAGCGTATTTCTGCTGTGTTGCAACATGTGAACTCAAACTACGAGATTGATATTTTCAAAACATTAATCGCAAAAACGGC GGAAATTGTAGGCGCAACAGATTTAACTAACAAATCACTACGTGTTATTGCTGACCATATTCGTTCTTGTGCATATTTAA TCGCCGATGGCGTTATCCCATCAAATGAAGGGCGTGGTTATGTCTTACGTCGTATTATTCGCCGCGCAGTTCGTCACGGT CATCTATTAGGTGCCAAAGAATCCTTTTTCTATAAACTCGTGCCAACTCTAATTGAAGTAATGGCTGAAGCTGGAAAAGA TGTAAAAGCAAAACAAACAAATGTTGAAAAACTATTACGTCTAGAAGAAGAACAATTTGCTCGCACTCTAGAACGTGGCT TGAGCTTATTAGATGAAGCCCTTTCTCAAGTGAAAGATGGCATTCTTTCAGGTGAAGTTGCATTCAAACTTTATGATACT TATGGTTTCCCATTGGATTTAACGGCTGATGTATGCCGTGAGCGTAACATTACTATTGATGAACAAGCGTTTGACCGTGA AATGGAAGCGCAGCGTACTCGTGCTCAAGCCGCGAGTCAGTTTGGTGTGGACTACAACAGCGTTATTCGTGTAGATGGCG AAACTAAGTTTGAAGGCTATACTGAAGTAGAATCTCAGGCAAAAATTACCGCACTTTTCTATGATGGTAAATCAGTGGAA AGTATCGAAGCAGGTCAAAGTGCGGTCGTTATTTTAGAAAATACGCCATTTTATGCAGAATCAGGTGGTCAGATTGGCGA TAGCGGATATTTAAGCACACAAGGTGTAACCTTTAATGTGAAAGATACCCAAAAATATGGGCAAGTATTTGGACACATTG GAGAATTAACGCAAGGAAGTTTAAAAGTTGGACAATCAGTGAATGCGATTGTGGACGCTAAACGTCGCCACAACACATCA CTCAATCACTCAGCGACACACTTATTGCACGCTGCCTTACGTCAAATTCTAGGTTTACACGTTGTGCAAAAAGGCTCGCT TGTTTCAGATAAAGCCTTACGTTTTGACTTTGCGCAACCAGAAGCCATTACCAAAGAGCAATTGAGTGAAATTGAAACAT TAGTAAACCAAAAAATCCGCGCTAACTTTCCAGTTCAAACGGATATTATGGATATTGATTCCGCAAAAGCGAAAGGAGCA ATGGCTCTCTTTGGCGAAAAATATGGCGATAAGGTTCGTGTATTAACCATGGGCGATTTCTCAATTGAGCTGTGTGGCGG TATTCACGCAAAACGCACAGGCGATATTGGTTTATTTAAAATTATTACTGAAAACGCAGTGGCTGCAGGCATTCGTCGTA TTGAAGCTGTAACAGGTCAAAATGCCATTGACTGGTTACATAATCAACAACGCATTCTGACCCAAAGCGCAGACTTATTA AAATCAGACGTAAATACCTTAGCGGAAAAAATCCAACAACTTCAAGACAAAACGAAGAAAGTGGAAAAAGAATTACAAGG TCTAAAAGAAAAAGCCGCAATGCAGGCTGGTTCTGATTTTGTAAAAAGTGCGGTCAAAATCAACGGTGTTTCTGTTATTG CACAACAATTAGATGGTATAGAAACAAAATCATTACGCGTAATGGTCGATGATTTAAAAAATCAACTCGGATCAGGCGTA ATTGCATTTGCATCAATATTAGATAAAAAAGTTAATCTCGTCGTTGGAGTGACAAATGATTTAACCGCCAAAATAAAAGC TGGAGAACTTGTTAATTTAATGGCTCAACAAGTTGGAGGAAAAGGCGGTGGTCGTCCAGATATGGCAATGGCAGGAGGTT CCCAACCAGAAAATGTGGCACAAGCAATTAAAGTGGCACAAGACTGGTTAAACAAAAATCTGTAG
Upstream 100 bases:
>100_bases TTGGGGTTTTGGCAAAAAGCCTTTTTATAAATTTCAAAAATATGCAAAAATAGAACGGTTTAGTTTTTATTTTTATTATG GGTAACAAGGATTCTTTTTA
Downstream 100 bases:
>100_bases TACAAGCTGGTTGGTGGAATGCCAACCGTTCCTTGATTGATAGGATATCTAATAAATGCAAACTAAGGAGATAAAAGATG TTAATCTTAACTCGTAAAGT
Product: alanyl-tRNA synthetase
Products: NA
Alternate protein names: Alanine--tRNA ligase; AlaRS [H]
Number of amino acids: Translated: 874; Mature: 874
Protein sequence:
>874_residues MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQRCVRAGGKHNDLENV GYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNK GSPYASDNFWAMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIPSNEGRGYVLRRIIRRAVRHG HLLGAKESFFYKLVPTLIEVMAEAGKDVKAKQTNVEKLLRLEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDT YGFPLDLTADVCRERNITIDEQAFDREMEAQRTRAQAASQFGVDYNSVIRVDGETKFEGYTEVESQAKITALFYDGKSVE SIEAGQSAVVILENTPFYAESGGQIGDSGYLSTQGVTFNVKDTQKYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTS LNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGA MALFGEKYGDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAVTGQNAIDWLHNQQRILTQSADLL KSDVNTLAEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVIAQQLDGIETKSLRVMVDDLKNQLGSGV IAFASILDKKVNLVVGVTNDLTAKIKAGELVNLMAQQVGGKGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL
Sequences:
>Translated_874_residues MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQRCVRAGGKHNDLENV GYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNK GSPYASDNFWAMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIPSNEGRGYVLRRIIRRAVRHG HLLGAKESFFYKLVPTLIEVMAEAGKDVKAKQTNVEKLLRLEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDT YGFPLDLTADVCRERNITIDEQAFDREMEAQRTRAQAASQFGVDYNSVIRVDGETKFEGYTEVESQAKITALFYDGKSVE SIEAGQSAVVILENTPFYAESGGQIGDSGYLSTQGVTFNVKDTQKYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTS LNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGA MALFGEKYGDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAVTGQNAIDWLHNQQRILTQSADLL KSDVNTLAEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVIAQQLDGIETKSLRVMVDDLKNQLGSGV IAFASILDKKVNLVVGVTNDLTAKIKAGELVNLMAQQVGGKGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL >Mature_874_residues MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQRCVRAGGKHNDLENV GYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNK GSPYASDNFWAMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIPSNEGRGYVLRRIIRRAVRHG HLLGAKESFFYKLVPTLIEVMAEAGKDVKAKQTNVEKLLRLEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDT YGFPLDLTADVCRERNITIDEQAFDREMEAQRTRAQAASQFGVDYNSVIRVDGETKFEGYTEVESQAKITALFYDGKSVE SIEAGQSAVVILENTPFYAESGGQIGDSGYLSTQGVTFNVKDTQKYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTS LNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGA MALFGEKYGDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAVTGQNAIDWLHNQQRILTQSADLL KSDVNTLAEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVIAQQLDGIETKSLRVMVDDLKNQLGSGV IAFASILDKKVNLVVGVTNDLTAKIKAGELVNLMAQQVGGKGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL
Specific function: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction:alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editin
COG id: COG0013
COG function: function code J; Alanyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI109148542, Length=867, Percent_Identity=38.8696655132641, Blast_Score=528, Evalue=1e-149, Organism=Homo sapiens, GI38569417, Length=797, Percent_Identity=37.3902132998745, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI217416402, Length=391, Percent_Identity=23.0179028132992, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI13376886, Length=260, Percent_Identity=25.7692307692308, Blast_Score=78, Evalue=3e-14, Organism=Escherichia coli, GI1789048, Length=873, Percent_Identity=69.3012600229095, Blast_Score=1310, Evalue=0.0, Organism=Caenorhabditis elegans, GI17506981, Length=985, Percent_Identity=35.2284263959391, Blast_Score=519, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17536681, Length=749, Percent_Identity=35.3805073431242, Blast_Score=417, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6324911, Length=786, Percent_Identity=40.5852417302799, Blast_Score=541, Evalue=1e-154, Organism=Drosophila melanogaster, GI24582809, Length=975, Percent_Identity=37.025641025641, Blast_Score=552, Evalue=1e-157, Organism=Drosophila melanogaster, GI45552267, Length=975, Percent_Identity=37.025641025641, Blast_Score=552, Evalue=1e-157, Organism=Drosophila melanogaster, GI24658214, Length=892, Percent_Identity=30.0448430493274, Blast_Score=351, Evalue=1e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002318 - InterPro: IPR018162 - InterPro: IPR018165 - InterPro: IPR018164 - InterPro: IPR023033 - InterPro: IPR003156 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF02272 DHHA1; PF01411 tRNA-synt_2c; PF07973 tRNA_SAD [H]
EC number: =6.1.1.7 [H]
Molecular weight: Translated: 96510; Mature: 96510
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50860 AA_TRNA_LIGASE_II_ALA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSR CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHH ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWL HHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC GLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGP CCCCCCEEEEEEECCCCHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCEECCCCCCCCH CTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCH ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIP HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC SNEGRGYVLRRIIRRAVRHGHLLGAKESFFYKLVPTLIEVMAEAGKDVKAKQTNVEKLLR CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDTYGFPLDLTADVCRERNITID HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCC EQAFDREMEAQRTRAQAASQFGVDYNSVIRVDGETKFEGYTEVESQAKITALFYDGKSVE HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCCCCEEEEEEECCCCCC SIEAGQSAVVILENTPFYAESGGQIGDSGYLSTQGVTFNVKDTQKYGQVFGHIGELTQGS HHHCCCCEEEEEECCCCEECCCCCCCCCCCEEECCEEEEECCHHHHHHHHHHHHHHCCCH LKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQP HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCC EAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKYGDKVRVLTMGDF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCC SIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAVTGQNAIDWLHNQQRILTQSADLL EEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KSDVNTLAEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVIAQQLDGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC ETKSLRVMVDDLKNQLGSGVIAFASILDKKVNLVVGVTNDLTAKIKAGELVNLMAQQVGG CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHHHHCC KGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSR CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHH ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWL HHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC GLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGP CCCCCCEEEEEEECCCCHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCEECCCCCCCCH CTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCH ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIP HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC SNEGRGYVLRRIIRRAVRHGHLLGAKESFFYKLVPTLIEVMAEAGKDVKAKQTNVEKLLR CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDTYGFPLDLTADVCRERNITID HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCC EQAFDREMEAQRTRAQAASQFGVDYNSVIRVDGETKFEGYTEVESQAKITALFYDGKSVE HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCCCCEEEEEEECCCCCC SIEAGQSAVVILENTPFYAESGGQIGDSGYLSTQGVTFNVKDTQKYGQVFGHIGELTQGS HHHCCCCEEEEEECCCCEECCCCCCCCCCCEEECCEEEEECCHHHHHHHHHHHHHHCCCH LKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQP HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCC EAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKYGDKVRVLTMGDF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCC SIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAVTGQNAIDWLHNQQRILTQSADLL EEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KSDVNTLAEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVIAQQLDGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC ETKSLRVMVDDLKNQLGSGVIAFASILDKKVNLVVGVTNDLTAKIKAGELVNLMAQQVGG CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHHHHCC KGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA