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The map label for this gene is ribB [H]

Identifier: 148827954

GI number: 148827954

Start: 1358958

End: 1359605

Strand: Direct

Name: ribB [H]

Synonym: CGSHiGG_07315

Alternate gene names: 148827954

Gene position: 1358958-1359605 (Clockwise)

Preceding gene: 148827951

Following gene: 148827955

Centisome position: 72.01

GC content: 41.2

Gene sequence:

>648_bases
ATGAATCAGTCAATTTTATCCCCATTCGGCAACACCGCTGAAGAACGCGTACTTAATGCAATTAATGCCTTTAAAAATGG
AACTGGCGTATTAGTTTTAGATGATGAAGATCGTGAAAATGAAGGCGATTTAATTTTCCCAGCAGAAACAATCACGCCAG
AACAAATGGCAAAATTAATTCGTTATGGCAGTGGCATTGTTTGTTTATGCATTACTGATGAACGTTGCCAACAACTCGAT
TTACCGTCAATGGTAGAACACAATAATAGCGTAAACAAAACGGCTTTTACTGTGACGATTGAAGCCGCAAAAGGTGTTTC
TACGGGCGTATCTGCCGCAGACCGAGTCACAACCATTCAAACGGCGATTGCTGATAATGCAGTTCCAACAGATTTACATC
GTCCAGGCCATGTTTTCCCACTTCGTGCAGTAAATGGTGGCGTACTTACTCGTCGCGGACACACAGAAGCTTCCGTTGAT
TTAGCTCGTCTGGCAGGATTTAAAGAAGCAGGTGTGATTTGTGAAATCACGAATGATGACGGCACAATGGCTCGCACCCC
CGATATTGTAGAATTTGCAAAGAAATTTGGTTATTCTGTGCTAACCATTGAAGATTTGGTTGAATATCGTTTAGCAAATA
ATATTTAA

Upstream 100 bases:

>100_bases
AAGAGAATAAAACGAGTTGGGTTCCCAAATCGTTCATTTTATTTGCATTTCTCAGCCCTGATTCTGGTATTTAATTGAAA
TCTCAAATTAGGAAATTACT

Downstream 100 bases:

>100_bases
TTTTAGAGAGAAAAGTGCGGTTAAAATTTCTATGATTTTCACTGCACTTGTTATATTATATCGTTCCATCTTTTTATTTA
TTTTGGTAACTTTTATGCTC

Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase

Products: NA

Alternate protein names: DHBP synthase [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNQSILSPFGNTAEERVLNAINAFKNGTGVLVLDDEDRENEGDLIFPAETITPEQMAKLIRYGSGIVCLCITDERCQQLD
LPSMVEHNNSVNKTAFTVTIEAAKGVSTGVSAADRVTTIQTAIADNAVPTDLHRPGHVFPLRAVNGGVLTRRGHTEASVD
LARLAGFKEAGVICEITNDDGTMARTPDIVEFAKKFGYSVLTIEDLVEYRLANNI

Sequences:

>Translated_215_residues
MNQSILSPFGNTAEERVLNAINAFKNGTGVLVLDDEDRENEGDLIFPAETITPEQMAKLIRYGSGIVCLCITDERCQQLD
LPSMVEHNNSVNKTAFTVTIEAAKGVSTGVSAADRVTTIQTAIADNAVPTDLHRPGHVFPLRAVNGGVLTRRGHTEASVD
LARLAGFKEAGVICEITNDDGTMARTPDIVEFAKKFGYSVLTIEDLVEYRLANNI
>Mature_215_residues
MNQSILSPFGNTAEERVLNAINAFKNGTGVLVLDDEDRENEGDLIFPAETITPEQMAKLIRYGSGIVCLCITDERCQQLD
LPSMVEHNNSVNKTAFTVTIEAAKGVSTGVSAADRVTTIQTAIADNAVPTDLHRPGHVFPLRAVNGGVLTRRGHTEASVD
LARLAGFKEAGVICEITNDDGTMARTPDIVEFAKKFGYSVLTIEDLVEYRLANNI

Specific function: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate [H]

COG id: COG0108

COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHBP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1789420, Length=213, Percent_Identity=69.4835680751174, Blast_Score=302, Evalue=1e-83,
Organism=Saccharomyces cerevisiae, GI6320695, Length=199, Percent_Identity=44.7236180904523, Blast_Score=172, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR000422 [H]

Pfam domain/function: PF00926 DHBP_synthase [H]

EC number: =4.1.99.12 [H]

Molecular weight: Translated: 23250; Mature: 23250

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSILSPFGNTAEERVLNAINAFKNGTGVLVLDDEDRENEGDLIFPAETITPEQMAKLI
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHH
RYGSGIVCLCITDERCQQLDLPSMVEHNNSVNKTAFTVTIEAAKGVSTGVSAADRVTTIQ
HCCCCEEEEEECHHHHHHCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHH
TAIADNAVPTDLHRPGHVFPLRAVNGGVLTRRGHTEASVDLARLAGFKEAGVICEITNDD
HHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCC
GTMARTPDIVEFAKKFGYSVLTIEDLVEYRLANNI
CCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MNQSILSPFGNTAEERVLNAINAFKNGTGVLVLDDEDRENEGDLIFPAETITPEQMAKLI
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHH
RYGSGIVCLCITDERCQQLDLPSMVEHNNSVNKTAFTVTIEAAKGVSTGVSAADRVTTIQ
HCCCCEEEEEECHHHHHHCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHH
TAIADNAVPTDLHRPGHVFPLRAVNGGVLTRRGHTEASVDLARLAGFKEAGVICEITNDD
HHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCC
GTMARTPDIVEFAKKFGYSVLTIEDLVEYRLANNI
CCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA