Definition | Haemophilus influenzae PittGG chromosome, complete genome. |
---|---|
Accession | NC_009567 |
Length | 1,887,192 |
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The map label for this gene is 148827925
Identifier: 148827925
GI number: 148827925
Start: 1321455
End: 1322981
Strand: Reverse
Name: 148827925
Synonym: CGSHiGG_07150
Alternate gene names: NA
Gene position: 1322981-1321455 (Counterclockwise)
Preceding gene: 148827929
Following gene: 148827924
Centisome position: 70.1
GC content: 41.13
Gene sequence:
>1527_bases ATGGCTCACTCAGCCCCAAAAGCACAAAAGCGTGAGACTTTTTCTGGTCGTCGCGCATTTATTCTGGCAGCAATTGGTTC TGCCGTTGGTCTTGGTAATATTTGGCGTTTCCCTTATACCACTTATGAAAACGGTGGTGGCGCATTTATCATCCCTTACC TTATTGCATTATTAACGGCAGGGATTCCTCTTTTATTCCTAGATTATGCCATTGGGCACCGTCATCGTGGTGGTGCGCCA CTTTCTTATCGTCGTGTTAGCCCGCACTTTGAAGTGTTTGGCTGGTGGCAAATGATGGTGAATGTCATCATCGGATTATA TTACGCTGTAGTGTTAGGCTGGGCAGCAAGCTACACATATTTTTCTTTCACTGGTGCGTGGGGCGATAAACCCATTGATT TCTTCATCGGCGAATTTTTAAAAATGGGCGATATTAAAAACGGTATCAGCTTTGAATTTGTTGGTATGGTAACCGCACCA TTAATTGCGATGTGGATTGTTGCCTTAGGCGTGCTTTCTATGGGTGTTCAAAAAGGAATTGCTAAGGTCTCTTCCGTATT AATGCCAGTGCTCGTCGTGATGTTTATGGTGCTTGTGATTTATTCCTTATTCTTACCAGGTGCGGCAAAAGGTTTAGATG CATTATTTACGCCAGATTGGTCGAAACTTTCTAATCCAAGTGTGTGGATTGCCGCTTATGGACAAATCTTCTTCTCTCTT TCAATCGGCTTTGGGATTATGGTGACTTACGCCTCTTATCTTAAAAAAGAATCCGATTTGACTGGTAGTGGCTTGGTTGT AGGTTTTGCTAACAGTAGCTTTGAAGTGTTAGCAGGTATCGGCGTATTTGCAGCATTAGGTTTTATTGCTACAGCGCAAG GTCAAGAAGTTAGCGAAGTAGCAAAAGGCGGAATTGGTTTAGCATTTTTCGCATTCCCAACCATCATCAACAAAGCACCA TTTGGCGAAGTGCTAGGCATGTTATTCTTTGGTTCATTAACCTTTGCCGCATTGACTTCATTCATCTCAGTTATCGAAGT AATTATTTCCGCAATTCAGGATAAAATTCGCATTAGCCGTGGAAAAGTGACATTCATCGTGGGTGTACCAATGATGCTAG TTTCTGTCATCTTATTCGGCACAACAACTGGCTTACCGATGTTAGATGTGTTCGATAAATTTGTGAACTATTTCGGTATT GTTGCCGTAGCATTTGCGTCTTTAATTGCGATTGTAGCAAATGAAAAACTCGGTTTATTAGGTAATCACTTAAACGAAAC GTCATCTTTCAAAGTAGGTTTCTTCTGGCGTTTATGCATTGTATTAACGAGTGGTGTTTTAGCATTTATGCTTTTCAGCG AAGGGGCAAAAGTCTTCTCTGAAGGTTACGAAGGTTATCCAAACTGGTTTGTAAATACCTTTGGTTGGGGAATGTCTATT AGCTTACTTGTCGTGGCATTTTTCCTTTCTCGCTTAAAATGGAAAAGCGAAACCAAATTAACGATTGATGAAACTAAAGG AGAATAA
Upstream 100 bases:
>100_bases AAAAATTCGTGAATTTTTACCGCTCTTTAAGCTTATTTATTGACTGATGATTAGATTTCATTATATTGAAACTCTTTTCA TTTTTTACATAGGATAATTT
Downstream 100 bases:
>100_bases AATGACTACTGGCGCAATTATTATGATGATCATAGCCCTTACTTTATTGTGGGGAGGATTAATTTACGCGTTGCTTCGCT TACCGAAAGAAAACTAATCC
Product: putative sodium-dependent transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MAHSAPKAQKRETFSGRRAFILAAIGSAVGLGNIWRFPYTTYENGGGAFIIPYLIALLTAGIPLLFLDYAIGHRHRGGAP LSYRRVSPHFEVFGWWQMMVNVIIGLYYAVVLGWAASYTYFSFTGAWGDKPIDFFIGEFLKMGDIKNGISFEFVGMVTAP LIAMWIVALGVLSMGVQKGIAKVSSVLMPVLVVMFMVLVIYSLFLPGAAKGLDALFTPDWSKLSNPSVWIAAYGQIFFSL SIGFGIMVTYASYLKKESDLTGSGLVVGFANSSFEVLAGIGVFAALGFIATAQGQEVSEVAKGGIGLAFFAFPTIINKAP FGEVLGMLFFGSLTFAALTSFISVIEVIISAIQDKIRISRGKVTFIVGVPMMLVSVILFGTTTGLPMLDVFDKFVNYFGI VAVAFASLIAIVANEKLGLLGNHLNETSSFKVGFFWRLCIVLTSGVLAFMLFSEGAKVFSEGYEGYPNWFVNTFGWGMSI SLLVVAFFLSRLKWKSETKLTIDETKGE
Sequences:
>Translated_508_residues MAHSAPKAQKRETFSGRRAFILAAIGSAVGLGNIWRFPYTTYENGGGAFIIPYLIALLTAGIPLLFLDYAIGHRHRGGAP LSYRRVSPHFEVFGWWQMMVNVIIGLYYAVVLGWAASYTYFSFTGAWGDKPIDFFIGEFLKMGDIKNGISFEFVGMVTAP LIAMWIVALGVLSMGVQKGIAKVSSVLMPVLVVMFMVLVIYSLFLPGAAKGLDALFTPDWSKLSNPSVWIAAYGQIFFSL SIGFGIMVTYASYLKKESDLTGSGLVVGFANSSFEVLAGIGVFAALGFIATAQGQEVSEVAKGGIGLAFFAFPTIINKAP FGEVLGMLFFGSLTFAALTSFISVIEVIISAIQDKIRISRGKVTFIVGVPMMLVSVILFGTTTGLPMLDVFDKFVNYFGI VAVAFASLIAIVANEKLGLLGNHLNETSSFKVGFFWRLCIVLTSGVLAFMLFSEGAKVFSEGYEGYPNWFVNTFGWGMSI SLLVVAFFLSRLKWKSETKLTIDETKGE >Mature_507_residues AHSAPKAQKRETFSGRRAFILAAIGSAVGLGNIWRFPYTTYENGGGAFIIPYLIALLTAGIPLLFLDYAIGHRHRGGAPL SYRRVSPHFEVFGWWQMMVNVIIGLYYAVVLGWAASYTYFSFTGAWGDKPIDFFIGEFLKMGDIKNGISFEFVGMVTAPL IAMWIVALGVLSMGVQKGIAKVSSVLMPVLVVMFMVLVIYSLFLPGAAKGLDALFTPDWSKLSNPSVWIAAYGQIFFSLS IGFGIMVTYASYLKKESDLTGSGLVVGFANSSFEVLAGIGVFAALGFIATAQGQEVSEVAKGGIGLAFFAFPTIINKAPF GEVLGMLFFGSLTFAALTSFISVIEVIISAIQDKIRISRGKVTFIVGVPMMLVSVILFGTTTGLPMLDVFDKFVNYFGIV AVAFASLIAIVANEKLGLLGNHLNETSSFKVGFFWRLCIVLTSGVLAFMLFSEGAKVFSEGYEGYPNWFVNTFGWGMSIS LLVVAFFLSRLKWKSETKLTIDETKGE
Specific function: Putative sodium-dependent transporter [H]
COG id: COG0733
COG function: function code R; Na+-dependent transporters of the SNF family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]
Homologues:
Organism=Homo sapiens, GI21361581, Length=427, Percent_Identity=31.8501170960187, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI289191351, Length=528, Percent_Identity=28.9772727272727, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4557046, Length=528, Percent_Identity=28.9772727272727, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI289191377, Length=528, Percent_Identity=28.9772727272727, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI92859670, Length=546, Percent_Identity=28.3882783882784, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI7657587, Length=536, Percent_Identity=27.2388059701493, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI4507043, Length=503, Percent_Identity=27.6341948310139, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI4507041, Length=520, Percent_Identity=26.9230769230769, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI6005715, Length=547, Percent_Identity=29.981718464351, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI171184408, Length=451, Percent_Identity=29.490022172949, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI171184406, Length=451, Percent_Identity=29.490022172949, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI171184404, Length=451, Percent_Identity=29.490022172949, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI134304856, Length=504, Percent_Identity=28.5714285714286, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI188528618, Length=523, Percent_Identity=26.3862332695985, Blast_Score=182, Evalue=9e-46, Organism=Homo sapiens, GI197276623, Length=346, Percent_Identity=31.7919075144509, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI54607094, Length=346, Percent_Identity=31.7919075144509, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI194018524, Length=575, Percent_Identity=27.304347826087, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI5032097, Length=348, Percent_Identity=32.183908045977, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI51468073, Length=557, Percent_Identity=25.1346499102334, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI58219014, Length=316, Percent_Identity=33.5443037974684, Blast_Score=166, Evalue=7e-41, Organism=Homo sapiens, GI67782317, Length=453, Percent_Identity=30.9050772626932, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI67782313, Length=453, Percent_Identity=30.9050772626932, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI67782315, Length=453, Percent_Identity=30.6843267108168, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI218563756, Length=349, Percent_Identity=32.0916905444126, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI11181770, Length=521, Percent_Identity=25.1439539347409, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI33354281, Length=312, Percent_Identity=30.7692307692308, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI12408638, Length=506, Percent_Identity=24.5059288537549, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI289191353, Length=432, Percent_Identity=25.6944444444444, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI300360519, Length=240, Percent_Identity=31.25, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI21361693, Length=126, Percent_Identity=39.6825396825397, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI197276625, Length=117, Percent_Identity=41.025641025641, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI218563758, Length=274, Percent_Identity=28.4671532846715, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI55749589, Length=312, Percent_Identity=29.4871794871795, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI226437581, Length=263, Percent_Identity=26.9961977186312, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI133952791, Length=561, Percent_Identity=29.9465240641711, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17555248, Length=488, Percent_Identity=27.6639344262295, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17554804, Length=408, Percent_Identity=31.1274509803922, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71995588, Length=561, Percent_Identity=24.9554367201426, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI25146584, Length=544, Percent_Identity=25.3676470588235, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71998244, Length=391, Percent_Identity=29.6675191815857, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17569475, Length=417, Percent_Identity=28.2973621103118, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17542050, Length=108, Percent_Identity=39.8148148148148, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI115534083, Length=536, Percent_Identity=22.2014925373134, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17535731, Length=259, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=7e-21, Organism=Caenorhabditis elegans, GI212642127, Length=263, Percent_Identity=30.4182509505703, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24762620, Length=518, Percent_Identity=29.9227799227799, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI17136952, Length=507, Percent_Identity=28.7968441814596, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI281364394, Length=500, Percent_Identity=29, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI28574704, Length=500, Percent_Identity=29, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI17136950, Length=500, Percent_Identity=29, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI28574702, Length=500, Percent_Identity=29, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI281364136, Length=571, Percent_Identity=28.0210157618214, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24639514, Length=538, Percent_Identity=27.5092936802974, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI221329674, Length=536, Percent_Identity=27.0522388059701, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI45550877, Length=530, Percent_Identity=27.5471698113208, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI24639516, Length=558, Percent_Identity=26.5232974910394, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI45551183, Length=396, Percent_Identity=31.3131313131313, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI281363702, Length=497, Percent_Identity=29.1750503018109, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI45551088, Length=490, Percent_Identity=28.3673469387755, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24652942, Length=490, Percent_Identity=28.3673469387755, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24655079, Length=543, Percent_Identity=27.6243093922652, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24582567, Length=440, Percent_Identity=28.8636363636364, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI19921936, Length=476, Percent_Identity=28.5714285714286, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI281365034, Length=546, Percent_Identity=28.2051282051282, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24661428, Length=406, Percent_Identity=28.8177339901478, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI281363700, Length=339, Percent_Identity=32.7433628318584, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI19921352, Length=552, Percent_Identity=27.7173913043478, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI24584353, Length=552, Percent_Identity=27.7173913043478, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI24639853, Length=503, Percent_Identity=26.6401590457256, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24582569, Length=399, Percent_Identity=27.5689223057644, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24654186, Length=308, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000175 [H]
Pfam domain/function: PF00209 SNF [H]
EC number: NA
Molecular weight: Translated: 55175; Mature: 55043
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3 ; PS00242 INTEGRIN_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSAPKAQKRETFSGRRAFILAAIGSAVGLGNIWRFPYTTYENGGGAFIIPYLIALLTA CCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEECCCCCEEECCCCEEHHHHHHHHHHC GIPLLFLDYAIGHRHRGGAPLSYRRVSPHFEVFGWWQMMVNVIIGLYYAVVLGWAASYTY CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE FSFTGAWGDKPIDFFIGEFLKMGDIKNGISFEFVGMVTAPLIAMWIVALGVLSMGVQKGI EEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKVSSVLMPVLVVMFMVLVIYSLFLPGAAKGLDALFTPDWSKLSNPSVWIAAYGQIFFSL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHCCCCCEEEEEHHHHHHHH SIGFGIMVTYASYLKKESDLTGSGLVVGFANSSFEVLAGIGVFAALGFIATAQGQEVSEV HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH AKGGIGLAFFAFPTIINKAPFGEVLGMLFFGSLTFAALTSFISVIEVIISAIQDKIRISR HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GKVTFIVGVPMMLVSVILFGTTTGLPMLDVFDKFVNYFGIVAVAFASLIAIVANEKLGLL CCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GNHLNETSSFKVGFFWRLCIVLTSGVLAFMLFSEGAKVFSEGYEGYPNWFVNTFGWGMSI HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCHHH SLLVVAFFLSRLKWKSETKLTIDETKGE HHHHHHHHHHHHCCCCCCCEEEECCCCC >Mature Secondary Structure AHSAPKAQKRETFSGRRAFILAAIGSAVGLGNIWRFPYTTYENGGGAFIIPYLIALLTA CCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEECCCCCEEECCCCEEHHHHHHHHHHC GIPLLFLDYAIGHRHRGGAPLSYRRVSPHFEVFGWWQMMVNVIIGLYYAVVLGWAASYTY CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE FSFTGAWGDKPIDFFIGEFLKMGDIKNGISFEFVGMVTAPLIAMWIVALGVLSMGVQKGI EEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKVSSVLMPVLVVMFMVLVIYSLFLPGAAKGLDALFTPDWSKLSNPSVWIAAYGQIFFSL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHCCCCCEEEEEHHHHHHHH SIGFGIMVTYASYLKKESDLTGSGLVVGFANSSFEVLAGIGVFAALGFIATAQGQEVSEV HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH AKGGIGLAFFAFPTIINKAPFGEVLGMLFFGSLTFAALTSFISVIEVIISAIQDKIRISR HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GKVTFIVGVPMMLVSVILFGTTTGLPMLDVFDKFVNYFGIVAVAFASLIAIVANEKLGLL CCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GNHLNETSSFKVGFFWRLCIVLTSGVLAFMLFSEGAKVFSEGYEGYPNWFVNTFGWGMSI HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCHHH SLLVVAFFLSRLKWKSETKLTIDETKGE HHHHHHHHHHHHCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]