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The map label for this gene is narP

Identifier: 148827914

GI number: 148827914

Start: 1309429

End: 1310055

Strand: Reverse

Name: narP

Synonym: CGSHiGG_07085

Alternate gene names: 148827914

Gene position: 1310055-1309429 (Counterclockwise)

Preceding gene: 148827915

Following gene: 148827910

Centisome position: 69.42

GC content: 36.36

Gene sequence:

>627_bases
ATGCAAGATAAGCTAAAAGTTTTATTGATTGACGACCATCCGTTAATGCGTCGTGGCATTAAACAACTTGTAGAATTAGA
CGATAACTTTGAAGTAGTGGCTGACGTAAGCAGCGGCACAGAAGGGATTTCTGTGGCATTACAAACATCACCTGATGTGA
TCATTTTAGATCTCAACATGAAAGGACTTTCTGGGTTAGATACGCTCAAAGGATTACGTGCAGAAGGCGTTGATGCGCGA
ATTTTAATTTTAACAGTGTCTGATGCAAAAAATGATATTTATACTCTAATTGATGCAGGTGCAGATGGTTATTTGTTAAA
AGATACTGAACCTGATACATTGCTAGAGCAAATCAAGCGCATAGCACAAGGCGAAGTCATTCTGAGTGATTCTATTAAAA
ATTTATTATTAGAACGTACTCACGAAGATAATCCGTTAGACAGCTTAACGGATCGTGAAATGGGCGTACTTCGTCAAATT
GCAACTGGCTTATCAAACAAACAAATTGCAGCACAACTGTTTATTTCAGAAGAAACCGTAAAAGTACATATCCGTAATTT
ATTACGTAAATTAAATGTTCATTCTCGTGTTGCAGCAACGGTATTATTTTTTGAACAAAATCGTTAA

Upstream 100 bases:

>100_bases
ATAAATCAAATTTTTTTCTATTCTAGATTGGCATAGAATTGAATTCTTTATAAAATGTCATGCTTTTTAAAGTGGACTTC
TAACCACTAAAGGAGAAATT

Downstream 100 bases:

>100_bases
AAATAATCATAAAAAATGCGCTAGGAGAGACTTAGCGCATTTTTCTTTAAAATTATAATATTTAAATTAGCTCAATAGAT
TTAATATCTTCTAATAAAAT

Product: nitrate/nitrite response regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGLDTLKGLRAEGVDAR
ILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQI
ATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLFFEQNR

Sequences:

>Translated_208_residues
MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGLDTLKGLRAEGVDAR
ILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQI
ATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLFFEQNR
>Mature_208_residues
MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGLDTLKGLRAEGVDAR
ILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQI
ATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLFFEQNR

Specific function: Could activate the expression of a formate dehydrogenase operon and could repress the transcription of the fumarate reductase (frdABCD) operon

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

Organism=Escherichia coli, GI1788521, Length=205, Percent_Identity=59.0243902439024, Blast_Score=238, Evalue=2e-64,
Organism=Escherichia coli, GI1787473, Length=210, Percent_Identity=42.3809523809524, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1788222, Length=202, Percent_Identity=30.6930693069307, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790102, Length=193, Percent_Identity=35.2331606217617, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1788712, Length=194, Percent_Identity=29.3814432989691, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786747, Length=196, Percent_Identity=29.0816326530612, Blast_Score=85, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NARP_HAEIN (P44845)

Other databases:

- EMBL:   L42023
- PIR:   A64089
- RefSeq:   NP_438884.1
- ProteinModelPortal:   P44845
- SMR:   P44845
- GeneID:   949754
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0726
- NMPDR:   fig|71421.1.peg.694
- TIGR:   HI_0726
- HOGENOM:   HBG753323
- OMA:   AINIACK
- ProtClustDB:   CLSK870627
- BioCyc:   HINF71421:HI_0726-MONOMER
- GO:   GO:0005622
- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00038
- SMART:   SM00421
- SMART:   SM00448

Pfam domain/function: PF00196 GerE; PF00072 Response_reg; SSF46894 Bipartite_resp_reg_C-effector; SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 23079; Mature: 23079

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00622 HTH_LUXR_1; PS50043 HTH_LUXR_2; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNM
CCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECC
KGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR
CCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHH
IAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETV
HHCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHH
KVHIRNLLRKLNVHSRVAATVLFFEQNR
HHHHHHHHHHHCCHHHHEEEEEEEECCC
>Mature Secondary Structure
MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNM
CCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECC
KGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR
CCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHH
IAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETV
HHCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHH
KVHIRNLLRKLNVHSRVAATVLFFEQNR
HHHHHHHHHHHCCHHHHEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800