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The map label for this gene is vacJ [C]

Identifier: 148827886

GI number: 148827886

Start: 1264029

End: 1264781

Strand: Direct

Name: vacJ [C]

Synonym: CGSHiGG_06905

Alternate gene names: 148827886

Gene position: 1264029-1264781 (Clockwise)

Preceding gene: 148827885

Following gene: 148827887

Centisome position: 66.98

GC content: 39.84

Gene sequence:

>753_bases
ATGAAAACAAAGGCAATTTTGACCGCACTTTTGGGTGCCATTGCACTAACAGGTTGTGCAAATAACAACGACACGAAACA
AGCGAGTGAGCGTAATGATTCTCTTGAAGGCTTCAATCGAACTATGTGGAAGTTTAACTATAATGTGCTAGATCGCTATG
TATTAGAACCTGTTGCAAAAGGTTGGAATAACTATGTGCCTAAGCCGATTTCTTCTGGTCTTGCTGGCATCGCAAATAAT
CTTGATGAGCCAGTCAGTTTCATAAACCGATTAATTGAAGGCGAACCGAAAAAAGCATTTGTTCACTTTAATCGTTTTTG
GATTAACACTGTATTTGGACTAGGTGGTTTTATTGATTTTGCGAGCGCAAGCAAAGAATTACGCATAGATAATCAACGTG
GATTTGGGGAAACTTTAGGTAGCTACGGCGTAGATGCTGGCACTTATATTGTGCTACCGATTTATAATGCAACAACGCCA
CGCCAATTAACGGGTGCTGTGGTTGATGCAGCTTATATGTATCCATTTTGGCAATGGGTTGGTGGTCCGTGGGCATTAGT
GAAATATGGTGTGCAAGCAGTGGATGGCCGTGCGAAAAATCTCAATAATGCAGAATTGTTACGTCAAGCTCAAGATCCAT
ATATCACGTTCCGAGAAGCTTATTACCAAAATTTACAATTTAAAGTAAACGATGGGAAATTAGTCGAAAGCAAAGAATCA
CTTCCCGATGACATACTAAAAGACATTGATTAA

Upstream 100 bases:

>100_bases
TAAGAAATAATTAAAAGATAACCGCACTTTTATAGTGCGGTTTTTTGTTTTTATTTAACAAATTAGGTAGAATAATCCCA
TATTTATGTAAGGATCAAAA

Downstream 100 bases:

>100_bases
TAAACAGAAAAGTGCGGTAAAAATTACCCAATTTTTTATCAATTAAGGAGAAAATGATGACTCAAATTATTCATACTGAA
AAAGCACCTGCGGCCATTGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKTKAILTALLGAIALTGCANNNDTKQASERNDSLEGFNRTMWKFNYNVLDRYVLEPVAKGWNNYVPKPISSGLAGIANN
LDEPVSFINRLIEGEPKKAFVHFNRFWINTVFGLGGFIDFASASKELRIDNQRGFGETLGSYGVDAGTYIVLPIYNATTP
RQLTGAVVDAAYMYPFWQWVGGPWALVKYGVQAVDGRAKNLNNAELLRQAQDPYITFREAYYQNLQFKVNDGKLVESKES
LPDDILKDID

Sequences:

>Translated_250_residues
MKTKAILTALLGAIALTGCANNNDTKQASERNDSLEGFNRTMWKFNYNVLDRYVLEPVAKGWNNYVPKPISSGLAGIANN
LDEPVSFINRLIEGEPKKAFVHFNRFWINTVFGLGGFIDFASASKELRIDNQRGFGETLGSYGVDAGTYIVLPIYNATTP
RQLTGAVVDAAYMYPFWQWVGGPWALVKYGVQAVDGRAKNLNNAELLRQAQDPYITFREAYYQNLQFKVNDGKLVESKES
LPDDILKDID
>Mature_250_residues
MKTKAILTALLGAIALTGCANNNDTKQASERNDSLEGFNRTMWKFNYNVLDRYVLEPVAKGWNNYVPKPISSGLAGIANN
LDEPVSFINRLIEGEPKKAFVHFNRFWINTVFGLGGFIDFASASKELRIDNQRGFGETLGSYGVDAGTYIVLPIYNATTP
RQLTGAVVDAAYMYPFWQWVGGPWALVKYGVQAVDGRAKNLNNAELLRQAQDPYITFREAYYQNLQFKVNDGKLVESKES
LPDDILKDID

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=253, Percent_Identity=43.4782608695652, Blast_Score=206, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 27964; Mature: 27964

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKAILTALLGAIALTGCANNNDTKQASERNDSLEGFNRTMWKFNYNVLDRYVLEPVAK
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHEECHHHHHHHHHHHHHH
GWNNYVPKPISSGLAGIANNLDEPVSFINRLIEGEPKKAFVHFNRFWINTVFGLGGFIDF
HHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH
ASASKELRIDNQRGFGETLGSYGVDAGTYIVLPIYNATTPRQLTGAVVDAAYMYPFWQWV
HCCCCCEEECCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
GGPWALVKYGVQAVDGRAKNLNNAELLRQAQDPYITFREAYYQNLQFKVNDGKLVESKES
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCEECCHHC
LPDDILKDID
CCHHHHHHCC
>Mature Secondary Structure
MKTKAILTALLGAIALTGCANNNDTKQASERNDSLEGFNRTMWKFNYNVLDRYVLEPVAK
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHEECHHHHHHHHHHHHHH
GWNNYVPKPISSGLAGIANNLDEPVSFINRLIEGEPKKAFVHFNRFWINTVFGLGGFIDF
HHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH
ASASKELRIDNQRGFGETLGSYGVDAGTYIVLPIYNATTPRQLTGAVVDAAYMYPFWQWV
HCCCCCEEECCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
GGPWALVKYGVQAVDGRAKNLNNAELLRQAQDPYITFREAYYQNLQFKVNDGKLVESKES
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCEECCHHC
LPDDILKDID
CCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]