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The map label for this gene is 148827838

Identifier: 148827838

GI number: 148827838

Start: 1200621

End: 1200917

Strand: Reverse

Name: 148827838

Synonym: CGSHiGG_06580

Alternate gene names: NA

Gene position: 1200917-1200621 (Counterclockwise)

Preceding gene: 148827839

Following gene: 148827837

Centisome position: 63.64

GC content: 37.71

Gene sequence:

>297_bases
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTA
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Upstream 100 bases:

>100_bases
GTCTTACTACATCAATTTATGAAGAAAACACAAAAAACGCCAAAACGAGAAATCCAAACAGCCCAACAACGCTTAAGTGA
ATTAAAAGAGAGATTGAAAA

Downstream 100 bases:

>100_bases
GATATACCCGTTATATTGACTTGTTATACTATAAATAATTTTTATTGCGTCTTATTATACGTGGCTTTTTTGACTAGAAA
ATCGATAAAATCGGAATAGA

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Sequences:

>Translated_98_residues
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA
>Mature_98_residues
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y659_HAEIN (P44030)

Other databases:

- EMBL:   L42023
- PIR:   C64011
- RefSeq:   NP_438819.1
- ProteinModelPortal:   P44030
- SMR:   P44030
- GeneID:   949700
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0659
- TIGR:   HI_0659
- HOGENOM:   HBG701930
- OMA:   ARHEQGI
- ProtClustDB:   CLSK892377
- BioCyc:   HINF71421:HI_0659-MONOMER
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 11093; Mature: 11093

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQP
CCCCCCCCCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
MIARIEKGQTNPQLETLLKLLAPLGKTLSIVPLRVKNA
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCC
>Mature Secondary Structure
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQP
CCCCCCCCCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
MIARIEKGQTNPQLETLLKLLAPLGKTLSIVPLRVKNA
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800