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The map label for this gene is yibD [C]

Identifier: 148827831

GI number: 148827831

Start: 1194417

End: 1195181

Strand: Direct

Name: yibD [C]

Synonym: CGSHiGG_06545

Alternate gene names: 148827831

Gene position: 1194417-1195181 (Clockwise)

Preceding gene: 148827825

Following gene: 148827841

Centisome position: 63.29

GC content: 39.74

Gene sequence:

>765_bases
ATGCCTACAATTAGCGTTGCGATGATTGTAAAAAATGAAGCACAAGATCTAGCGAATTGCTTAGATACCGTGAAAAATTG
GGTGGATGAAATTATCATTCTAGATTCTGGCAGCACAGATAACACTAAAGAAATTGCGCTTAGTTATGGGGCGAAATTCT
ATGAAAATAGAGACTGGCAAGGGTTTGGAAAACAACGCCAATTAGCCCAACAATATGTAACCAGTGATTATGTACTCTGG
TTAGATGCAGACGAACGCGTTACCCCCAAGCTACAACGGGCTATCTTAAGTGCGGTCAAAAATAATCGAGAAAACACCGT
TTATGAAATTCCACGAGTCAGTGAAGTATTTGGACGTGAAATTCGCCATTCAGGCTGGTATCCCGATTATGTGGTTCGCC
TCTATCGCACAAACTATGCGCAATATAACGACTCACTTGTACATGAAAAAGTGGAATTTCCAGCTGGCACAAAAGTAGAA
AAATTAACAGGGGATTTAGAGCATTTCACTTATAAAAGCATCCATCATTATCTAGTGAAATCCGCAGGTTATGCAAAAGC
ATGGGCAGACCAACGCCAAGCTAAAGGAAAAAAAGCCACACTTTGGCAAGGAATTACCCATGCGCTCGGTTGTTTTGTGA
AAATGTATTTGTTAAAAGCAGGTTTTTTAGATGGTAAACAAGGATTTTTATTAGCGGTGTTATCAGCACATTCAACCTTT
GTAAAATACGCCGATTTATGGGAGCGAGATCAACATAAACACTAG

Upstream 100 bases:

>100_bases
CAAATTAAAAGCAAGCTGGTATAAAAAAAACGCCACATAAATGAAATTCGGTTATACTTGAAAAAATTTCGGCTAGTATA
GCAAAAAAAGGATTGAAAAT

Downstream 100 bases:

>100_bases
CGAGTTTTGCAAGGACAATCATTTAAATGATCGTCCACTAACCCCATGGACTGCATAAAAGCATAACACGTGGTTTCGCC
AACAAAGACGAAACCACGTT

Product: UDP-glucose--lipooligosaccharide glucosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPTISVAMIVKNEAQDLANCLDTVKNWVDEIIILDSGSTDNTKEIALSYGAKFYENRDWQGFGKQRQLAQQYVTSDYVLW
LDADERVTPKLQRAILSAVKNNRENTVYEIPRVSEVFGREIRHSGWYPDYVVRLYRTNYAQYNDSLVHEKVEFPAGTKVE
KLTGDLEHFTYKSIHHYLVKSAGYAKAWADQRQAKGKKATLWQGITHALGCFVKMYLLKAGFLDGKQGFLLAVLSAHSTF
VKYADLWERDQHKH

Sequences:

>Translated_254_residues
MPTISVAMIVKNEAQDLANCLDTVKNWVDEIIILDSGSTDNTKEIALSYGAKFYENRDWQGFGKQRQLAQQYVTSDYVLW
LDADERVTPKLQRAILSAVKNNRENTVYEIPRVSEVFGREIRHSGWYPDYVVRLYRTNYAQYNDSLVHEKVEFPAGTKVE
KLTGDLEHFTYKSIHHYLVKSAGYAKAWADQRQAKGKKATLWQGITHALGCFVKMYLLKAGFLDGKQGFLLAVLSAHSTF
VKYADLWERDQHKH
>Mature_253_residues
PTISVAMIVKNEAQDLANCLDTVKNWVDEIIILDSGSTDNTKEIALSYGAKFYENRDWQGFGKQRQLAQQYVTSDYVLWL
DADERVTPKLQRAILSAVKNNRENTVYEIPRVSEVFGREIRHSGWYPDYVVRLYRTNYAQYNDSLVHEKVEFPAGTKVEK
LTGDLEHFTYKSIHHYLVKSAGYAKAWADQRQAKGKKATLWQGITHALGCFVKMYLLKAGFLDGKQGFLLAVLSAHSTFV
KYADLWERDQHKH

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 29232; Mature: 29101

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTISVAMIVKNEAQDLANCLDTVKNWVDEIIILDSGSTDNTKEIALSYGAKFYENRDWQ
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCHHHHCCCCCC
GFGKQRQLAQQYVTSDYVLWLDADERVTPKLQRAILSAVKNNRENTVYEIPRVSEVFGRE
CCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHH
IRHSGWYPDYVVRLYRTNYAQYNDSLVHEKVEFPAGTKVEKLTGDLEHFTYKSIHHYLVK
HHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SAGYAKAWADQRQAKGKKATLWQGITHALGCFVKMYLLKAGFLDGKQGFLLAVLSAHSTF
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VKYADLWERDQHKH
HHHHHHHHHCCCCC
>Mature Secondary Structure 
PTISVAMIVKNEAQDLANCLDTVKNWVDEIIILDSGSTDNTKEIALSYGAKFYENRDWQ
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCHHHHCCCCCC
GFGKQRQLAQQYVTSDYVLWLDADERVTPKLQRAILSAVKNNRENTVYEIPRVSEVFGRE
CCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHH
IRHSGWYPDYVVRLYRTNYAQYNDSLVHEKVEFPAGTKVEKLTGDLEHFTYKSIHHYLVK
HHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SAGYAKAWADQRQAKGKKATLWQGITHALGCFVKMYLLKAGFLDGKQGFLLAVLSAHSTF
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VKYADLWERDQHKH
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]