Click here to switch to the map view.

The map label for this gene is yfiC [C]

Identifier: 148827622

GI number: 148827622

Start: 969106

End: 969804

Strand: Direct

Name: yfiC [C]

Synonym: CGSHiGG_05325

Alternate gene names: 148827622

Gene position: 969106-969804 (Clockwise)

Preceding gene: 148827619

Following gene: 148827624

Centisome position: 51.35

GC content: 36.62

Gene sequence:

>699_bases
ATGAGCAGATTTACCTTTAAACAATTCCATATCAATCAAGATTCTTGTGCCATGAAAGTCAGCACTGATGGCATTTTGTT
AGGTGCTTGGGCAGATGTAAAGCATTGTAAAAATATTTTAGATATGGGGAGCGGCACAGGATTATTGGCGTTAATGTTGG
CACAACGAACTGAAGAAAACTGCCAAATTCAAGCGGTTGAGTTGGATCCCATTGCAGTAAAACAAGCACAAGAAAACATC
AATGATTCAGTGTGGAAAAATCGCATTCAACTTATTCAAACGGATATACAACATTTTTTACAAACCACTGCACAAACCTT
TGATTTAATTGTGGCAAATCCACCTTATTTTGAACAAGGTATTGCTTGCAAAAATGAGGAAAGAGAATTGGCTCGTTATA
CCAAGCAAAGCCACTTAAATTGGTTAGAATGGGCAGCCACGCGCTTATCTGAAAATGGGAGAATAAGTTTTGTTTTGCCT
TATGAGGCAGGCAAAACGCTCATAAAATCCACCGCACTTTTTTGCATAAAACAGACGAATGTCATCACTAAAATAGGAAA
AACGCCCCAAAGAATGTTGCTTACCTTTGCCAAACAGCCACAAGTTTTAATGCAAGATCAATTGGTAATTTATGATGCGG
ATAATCAATACACGGAAGCGTTTATTAAATTGACTAAAGACTTTTATTTGAAATTTTAA

Upstream 100 bases:

>100_bases
GATCAAATTGTTCAAATTGGGATAAATTCATTATTGTGCGGTTCTTTGTTAAAATTGGCGAGGATTATACCTGAAAGTGC
GGTCAATTTACGAAAAATTT

Downstream 100 bases:

>100_bases
AGGGGAAATCATTTTCCCCTTTAATCATACACTATCTAAAATACCACTTCGCTAACAACACACCCGCATTCACTGCAATG
TTTAAGCCTGATTTAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSRFTFKQFHINQDSCAMKVSTDGILLGAWADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENI
NDSVWKNRIQLIQTDIQHFLQTTAQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLNWLEWAATRLSENGRISFVLP
YEAGKTLIKSTALFCIKQTNVITKIGKTPQRMLLTFAKQPQVLMQDQLVIYDADNQYTEAFIKLTKDFYLKF

Sequences:

>Translated_232_residues
MSRFTFKQFHINQDSCAMKVSTDGILLGAWADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENI
NDSVWKNRIQLIQTDIQHFLQTTAQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLNWLEWAATRLSENGRISFVLP
YEAGKTLIKSTALFCIKQTNVITKIGKTPQRMLLTFAKQPQVLMQDQLVIYDADNQYTEAFIKLTKDFYLKF
>Mature_231_residues
SRFTFKQFHINQDSCAMKVSTDGILLGAWADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENIN
DSVWKNRIQLIQTDIQHFLQTTAQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLNWLEWAATRLSENGRISFVLPY
EAGKTLIKSTALFCIKQTNVITKIGKTPQRMLLTFAKQPQVLMQDQLVIYDADNQYTEAFIKLTKDFYLKF

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val) [H]

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI87082131, Length=231, Percent_Identity=46.7532467532467, Blast_Score=204, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR020596
- InterPro:   IPR007848
- InterPro:   IPR022882 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.55 [H]

Molecular weight: Translated: 26573; Mature: 26442

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFTFKQFHINQDSCAMKVSTDGILLGAWADVKHCKNILDMGSGTGLLALMLAQRTEEN
CCCCEEEEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCC
CQIQAVELDPIAVKQAQENINDSVWKNRIQLIQTDIQHFLQTTAQTFDLIVANPPYFEQG
CEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHCC
IACKNEERELARYTKQSHLNWLEWAATRLSENGRISFVLPYEAGKTLIKSTALFCIKQTN
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHEEECCC
VITKIGKTPQRMLLTFAKQPQVLMQDQLVIYDADNQYTEAFIKLTKDFYLKF
HHHHCCCCHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRFTFKQFHINQDSCAMKVSTDGILLGAWADVKHCKNILDMGSGTGLLALMLAQRTEEN
CCCEEEEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCC
CQIQAVELDPIAVKQAQENINDSVWKNRIQLIQTDIQHFLQTTAQTFDLIVANPPYFEQG
CEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHCC
IACKNEERELARYTKQSHLNWLEWAATRLSENGRISFVLPYEAGKTLIKSTALFCIKQTN
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHEEECCC
VITKIGKTPQRMLLTFAKQPQVLMQDQLVIYDADNQYTEAFIKLTKDFYLKF
HHHHCCCCHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA