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The map label for this gene is 148827614

Identifier: 148827614

GI number: 148827614

Start: 960142

End: 960378

Strand: Direct

Name: 148827614

Synonym: CGSHiGG_05255

Alternate gene names: NA

Gene position: 960142-960378 (Clockwise)

Preceding gene: 148827613

Following gene: 148827615

Centisome position: 50.88

GC content: 38.82

Gene sequence:

>237_bases
GTGCAAGCCGATTGGGGGCACGTGCGTGAAAAAGTAGAGACATATAATCCAAATCAACCTGAAATATTACAAGAGTATTT
AAACATCAAAACTCATTCCAACCATCCTCGTTTTTCTATTGGTTATGATTTCGGCAATTGGCGTTTAGCATTAGATTACT
CCCATTATGATCGCTGTTTAGAAAACGTGCGTTTTAAAACTCACGAAGCCTCTTTCGGTGTGCGTTACCGTTTTTAA

Upstream 100 bases:

>100_bases
TTTAACAAAAATCCTTTGGAAGAACCCTAATGAATATTCGAATTGAGAAATCTTCTCTTCTGCTGTACAAGCAAAGGAAG
ATAATGGAAAAGGGATTTAT

Downstream 100 bases:

>100_bases
TTAAACAAATTTAGTTTTCTATTTAAGCGGTCAAATTCTTCTCATTATTTGCAAAATGAGGGAAAAATTTGACCGCTTGT
TTTTTCTTGAAAAGAAGCGT

Product: 23S rRNA pseudouridylate synthase C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MQADWGHVREKVETYNPNQPEILQEYLNIKTHSNHPRFSIGYDFGNWRLALDYSHYDRCLENVRFKTHEASFGVRYRF

Sequences:

>Translated_78_residues
MQADWGHVREKVETYNPNQPEILQEYLNIKTHSNHPRFSIGYDFGNWRLALDYSHYDRCLENVRFKTHEASFGVRYRF
>Mature_78_residues
MQADWGHVREKVETYNPNQPEILQEYLNIKTHSNHPRFSIGYDFGNWRLALDYSHYDRCLENVRFKTHEASFGVRYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9494; Mature: 9494

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADWGHVREKVETYNPNQPEILQEYLNIKTHSNHPRFSIGYDFGNWRLALDYSHYDRCL
CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHH
ENVRFKTHEASFGVRYRF
HHCCCCCCCCCCCEEECC
>Mature Secondary Structure
MQADWGHVREKVETYNPNQPEILQEYLNIKTHSNHPRFSIGYDFGNWRLALDYSHYDRCL
CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHH
ENVRFKTHEASFGVRYRF
HHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA