Definition | Haemophilus influenzae PittGG chromosome, complete genome. |
---|---|
Accession | NC_009567 |
Length | 1,887,192 |
Click here to switch to the map view.
The map label for this gene is 148827550
Identifier: 148827550
GI number: 148827550
Start: 904012
End: 904416
Strand: Reverse
Name: 148827550
Synonym: CGSHiGG_04875
Alternate gene names: NA
Gene position: 904416-904012 (Counterclockwise)
Preceding gene: 148827551
Following gene: 148827549
Centisome position: 47.92
GC content: 41.73
Gene sequence:
>405_bases ATGAGCAAATTTAAGCTATCTGCTGCTAGTGAAGAAAAACTAGTAGGCGTTCACGCGGATTTAGTGAAAGTGGCGCACCG TGCAATTGAATTAAGTGTGGTGGATTTTAAAGTTATTGAGGGTAAACGCACGTTAGAGCGACAAAAAGAATTGTTTGCCA AGAAAGCGACAAAGACAATGAATAGTCGCCATTTAACTGGTCATGCGGTGGATTTAGTGCCGTTACCAGTGAATTGGAAT GATCGCGAGCCATTTAAGAATGTTGCCAGTGCTATGTTTCAAGCTGCTAAACAATTGGGCGTTGCTATTCGCTGGGGCGG TGATTGGAATATGAATGAGAGTTCTGATGATGAGCATTTTTATGATGGACCGCATTTTGAGTTATTACGGAGTGTATATC CATGA
Upstream 100 bases:
>100_bases GATTTAGTTTATGTAGGCTCAGGGCTTTCTGGTTATGGTGGTGGCGCGGTGCTTAATGCCATTTGGCGGGGGTTCTTTGC GTCTAAATTGGGGATTAAAG
Downstream 100 bases:
>100_bases CGTGGTGGCTATTTGTTATAAAAAAACTTGGGCTTAACGTGTTGAGTCATGGTTGCAAGCATTTCAATAAAGTTGTCGCT GTATTTGCAGGAGTGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Protein; Lysozyme; Phage Protein; L-Alanyl-D-Glutamate Peptidase; Bacteriophage P7 Related Protein; Phagelysin; Peptidase; Endolysin; Phage Capsid Scaffolding Protein
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSKFKLSAASEEKLVGVHADLVKVAHRAIELSVVDFKVIEGKRTLERQKELFAKKATKTMNSRHLTGHAVDLVPLPVNWN DREPFKNVASAMFQAAKQLGVAIRWGGDWNMNESSDDEHFYDGPHFELLRSVYP
Sequences:
>Translated_134_residues MSKFKLSAASEEKLVGVHADLVKVAHRAIELSVVDFKVIEGKRTLERQKELFAKKATKTMNSRHLTGHAVDLVPLPVNWN DREPFKNVASAMFQAAKQLGVAIRWGGDWNMNESSDDEHFYDGPHFELLRSVYP >Mature_133_residues SKFKLSAASEEKLVGVHADLVKVAHRAIELSVVDFKVIEGKRTLERQKELFAKKATKTMNSRHLTGHAVDLVPLPVNWND REPFKNVASAMFQAAKQLGVAIRWGGDWNMNESSDDEHFYDGPHFELLRSVYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15176; Mature: 15045
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFKLSAASEEKLVGVHADLVKVAHRAIELSVVDFKVIEGKRTLERQKELFAKKATKTM CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHH NSRHLTGHAVDLVPLPVNWNDREPFKNVASAMFQAAKQLGVAIRWGGDWNMNESSDDEHF CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCC YDGPHFELLRSVYP CCCCHHHHHHHHCC >Mature Secondary Structure SKFKLSAASEEKLVGVHADLVKVAHRAIELSVVDFKVIEGKRTLERQKELFAKKATKTM CCCCCCCCCCCCEEHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHH NSRHLTGHAVDLVPLPVNWNDREPFKNVASAMFQAAKQLGVAIRWGGDWNMNESSDDEHF CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCC YDGPHFELLRSVYP CCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA