Definition | Haemophilus influenzae PittGG chromosome, complete genome. |
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Accession | NC_009567 |
Length | 1,887,192 |
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The map label for this gene is 148827539
Identifier: 148827539
GI number: 148827539
Start: 894924
End: 895871
Strand: Reverse
Name: 148827539
Synonym: CGSHiGG_04820
Alternate gene names: NA
Gene position: 895871-894924 (Counterclockwise)
Preceding gene: 148827540
Following gene: 148827538
Centisome position: 47.47
GC content: 44.51
Gene sequence:
>948_bases ATGACAGATATTCGTCAAGATGCATTTGAGTTGAATGCGATTAATACTTGTTTAAATGCGGTGGGTGTATTTAACCAAGA TGCGGGCTTGTTTACGCAACGCCAATTAGAGTTTGTGCGCAACAAAATCTATGAAGAAAAATTACCGGGTATGAATGGCT TATCGCTCGTCCCAGTCTCTTCTGAATCCCCTGAATGGGCAGAAACCGTGACTGAACGCATTTACGATATGGTCGGCATG GCTAAAGTCGTTGCCAACTATGCCGATGATTTACCGCGTGCGGATGTGGCGATGACAGAACGTGCAGTAAAAGTGAAAAA CATCGGTGCTGCTTATGGCTACAATCTACAAGAGTTGAAAGCGGCGTCAGCTAATCAAACGGATTTACCGTCTTCTAAAG CTCGTGCAGCGCGTCGTGCGGTGGAAGTAAAGATGAACGAAATTGCCTTGTTAGGAGATAAAGAATTTGGTTTAAACGGC TTTATTAACCACCCGAATTTAGGAGAAACCTCGGTAACTGGTGGCTGGAAAACTGCAACGGCGGATGCGGTGCTAGCGGA TTTGGACAATCTACACGATACCGTCGTGTTGCAATCAAAAGGCGTGCATCAGCCAACACACTTATTGTTGTCGCTAACAG ATTATCAGACGTTATCCAGTAAGTATATGAACACGGCTGACAAAGTGGACGTATTGACGTTCTTCAAGCGTAAACATCCT AACTTAACTATTCAGGGCTTATGGGAATTAGAGAAAGCGGGCACAGGGAATAAGAACTTAGCTATTTGCTATGAAAAATC CCTTGATAACTTAAATCTTGAAACGCCGCAAGATTTTACCCAGTTACCAGCACAAGAACGCAATTTAGAGCTTGTTGTGA ACTGTGTGGCTCGTGTGGGCGGCGTGTTCTTACGTTATCCGTTATCGGCAACCAAAGCGGAGGTTTAG
Upstream 100 bases:
>100_bases GGTAAATATGGCAAGCTCGCATTAGTCGAGTTAGCTTAATTATTCAATGTTTAACGATGCCCTAAGTGAAAACTTGGGGC TTTTTTATTGGAGAAAAATA
Downstream 100 bases:
>100_bases CGATGATTGTACGTAATATTGAAGCCCGTTTAATTCGTGTTGGCGGCGAGTTTATCGCCCCTAATCAAGAGGTGGAAATT GCCGATGATGCGGTAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTDIRQDAFELNAINTCLNAVGVFNQDAGLFTQRQLEFVRNKIYEEKLPGMNGLSLVPVSSESPEWAETVTERIYDMVGM AKVVANYADDLPRADVAMTERAVKVKNIGAAYGYNLQELKAASANQTDLPSSKARAARRAVEVKMNEIALLGDKEFGLNG FINHPNLGETSVTGGWKTATADAVLADLDNLHDTVVLQSKGVHQPTHLLLSLTDYQTLSSKYMNTADKVDVLTFFKRKHP NLTIQGLWELEKAGTGNKNLAICYEKSLDNLNLETPQDFTQLPAQERNLELVVNCVARVGGVFLRYPLSATKAEV
Sequences:
>Translated_315_residues MTDIRQDAFELNAINTCLNAVGVFNQDAGLFTQRQLEFVRNKIYEEKLPGMNGLSLVPVSSESPEWAETVTERIYDMVGM AKVVANYADDLPRADVAMTERAVKVKNIGAAYGYNLQELKAASANQTDLPSSKARAARRAVEVKMNEIALLGDKEFGLNG FINHPNLGETSVTGGWKTATADAVLADLDNLHDTVVLQSKGVHQPTHLLLSLTDYQTLSSKYMNTADKVDVLTFFKRKHP NLTIQGLWELEKAGTGNKNLAICYEKSLDNLNLETPQDFTQLPAQERNLELVVNCVARVGGVFLRYPLSATKAEV >Mature_314_residues TDIRQDAFELNAINTCLNAVGVFNQDAGLFTQRQLEFVRNKIYEEKLPGMNGLSLVPVSSESPEWAETVTERIYDMVGMA KVVANYADDLPRADVAMTERAVKVKNIGAAYGYNLQELKAASANQTDLPSSKARAARRAVEVKMNEIALLGDKEFGLNGF INHPNLGETSVTGGWKTATADAVLADLDNLHDTVVLQSKGVHQPTHLLLSLTDYQTLSSKYMNTADKVDVLTFFKRKHPN LTIQGLWELEKAGTGNKNLAICYEKSLDNLNLETPQDFTQLPAQERNLELVVNCVARVGGVFLRYPLSATKAEV
Specific function: Unknown
COG id: COG4834
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34722; Mature: 34591
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIRQDAFELNAINTCLNAVGVFNQDAGLFTQRQLEFVRNKIYEEKLPGMNGLSLVPVS CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC SESPEWAETVTERIYDMVGMAKVVANYADDLPRADVAMTERAVKVKNIGAAYGYNLQELK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHH AASANQTDLPSSKARAARRAVEVKMNEIALLGDKEFGLNGFINHPNLGETSVTGGWKTAT HCCCCCCCCCCHHHHHHHHHHHEEHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH ADAVLADLDNLHDTVVLQSKGVHQPTHLLLSLTDYQTLSSKYMNTADKVDVLTFFKRKHP HHHHHHHHHCCCCEEEEECCCCCCCHHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NLTIQGLWELEKAGTGNKNLAICYEKSLDNLNLETPQDFTQLPAQERNLELVVNCVARVG CEEEEEEHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHC GVFLRYPLSATKAEV CEEEECCCCHHCCCC >Mature Secondary Structure TDIRQDAFELNAINTCLNAVGVFNQDAGLFTQRQLEFVRNKIYEEKLPGMNGLSLVPVS CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC SESPEWAETVTERIYDMVGMAKVVANYADDLPRADVAMTERAVKVKNIGAAYGYNLQELK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHH AASANQTDLPSSKARAARRAVEVKMNEIALLGDKEFGLNGFINHPNLGETSVTGGWKTAT HCCCCCCCCCCHHHHHHHHHHHEEHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH ADAVLADLDNLHDTVVLQSKGVHQPTHLLLSLTDYQTLSSKYMNTADKVDVLTFFKRKHP HHHHHHHHHCCCCEEEEECCCCCCCHHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NLTIQGLWELEKAGTGNKNLAICYEKSLDNLNLETPQDFTQLPAQERNLELVVNCVARVG CEEEEEEHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHC GVFLRYPLSATKAEV CEEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA