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The map label for this gene is qseB [H]

Identifier: 148825749

GI number: 148825749

Start: 708313

End: 708978

Strand: Direct

Name: qseB [H]

Synonym: CGSHiEE_03490

Alternate gene names: 148825749

Gene position: 708313-708978 (Clockwise)

Preceding gene: 148825748

Following gene: 148825750

Centisome position: 39.07

GC content: 38.89

Gene sequence:

>666_bases
ATGAGAATTTTATTAATAGAAGACGATAATCTAATCGGCAATGGGTTGCAGATTGGTTTAACTAAACTTGGTTTTGCGGT
GGATTGGTTTACCGATGGAAAAACAGGAATGGCTGCTTTAACCTCTGCGCCTTATGATGCGGTGGTATTGGATTTAACCT
TGCCTAAACTTGACGGATTAGAGGTATTGCAACAATGGCGATCTAATCATCAAGATGTTCCCGTATTAATTTTGACTGCT
CGCGATACTTTAGATGAACGAGTTAAAGGTTTACAAAGTGGTGCAGATGATTATCTTTGCAAGCCTTTTACTTTGGCTGA
AGTCGCCGCACGTTTACAAGCCCTTATTCGTCGTCGTTATGGATATCATCATTCTGTGATAGAACAGGCTGGTGTTAAGC
TAGATCAGAATCAACGTTCTGTTTGGCTGAATAATCAACCCATTTCTTTAACAAGCCGTGAATATAAATTGCTTGAATTA
TTTATGCTGAATAAAGATCGCGTATTGTCTCGCTCATCCATTGAAGAAAAATTATCCAGTTGGGATGAGGAAATTAGCAG
TGGCGCATTGGATGTGCATATTTATAATTTACGCCAAAAATTGGGGAAACAATTTATTCGCACGGTACACGGTGTTGGAT
ATGCTTTGGGACAAGTTGAAAAATGA

Upstream 100 bases:

>100_bases
GAGCTTGATGTATTACGTATCGAAAAAGTAGAATAATCATTCTTTCAAAATGGCGGGCATTAGCTCGCTATTTTTGTTTA
TAAAGTGCGGTCAATTTTTT

Downstream 100 bases:

>100_bases
AAAATAGAAGCCTTACGTTGCGTCTTATTTCTGTGCTTTGTTTAACCGCACTTTTTGTTTGGCTGGGTTCTACGCTTGTG
GCTTGGTGGCAAGTTCGCCA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQDVPVLILTA
RDTLDERVKGLQSGADDYLCKPFTLAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLEL
FMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK

Sequences:

>Translated_221_residues
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQDVPVLILTA
RDTLDERVKGLQSGADDYLCKPFTLAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLEL
FMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
>Mature_221_residues
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQDVPVLILTA
RDTLDERVKGLQSGADDYLCKPFTLAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLEL
FMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=60.091743119266, Blast_Score=275, Evalue=2e-75,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=43.0555555555556, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=38.4615384615385, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=36, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=37.1559633027523, Blast_Score=144, Evalue=3e-36,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=33.1818181818182, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=32.579185520362, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=31.8181818181818, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=29.9559471365639, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI2367329, Length=233, Percent_Identity=32.618025751073, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=29.7297297297297, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=30.4932735426009, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=27.4336283185841, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790299, Length=172, Percent_Identity=30.8139534883721, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=30.8411214953271, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790437, Length=124, Percent_Identity=29.0322580645161, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI48994928, Length=150, Percent_Identity=28.6666666666667, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24933; Mature: 24933

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL
CEEEEEECCCEECCCCEEHHHHHCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCH
EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFTLAEVAARLQALIRRRY
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS
CCHHHHHHHHCCEECCCCCEEEECCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
WDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL
CEEEEEECCCEECCCCEEHHHHHCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCH
EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFTLAEVAARLQALIRRRY
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS
CCHHHHHHHHCCEECCCCCEEEECCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
WDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]