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The map label for this gene is ygcU [H]

Identifier: 148824299

GI number: 148824299

Start: 3487143

End: 3488726

Strand: Reverse

Name: ygcU [H]

Synonym: TBFG_13124

Alternate gene names: 148824299

Gene position: 3488726-3487143 (Counterclockwise)

Preceding gene: 148824318

Following gene: 148824297

Centisome position: 78.85

GC content: 67.55

Gene sequence:

>1584_bases
ATGCGTTCGTGGTGGGGTTGGGGCACAGTCGAGGACGCGCTCTCCGATCAGGAGACGCAAGCGCTACAGTCGCGAGTCGC
GGCACTGGTGTCCGGCCATGACCTGAGCGACCACCCGCCGCCGGACCTGACCGCGCTCGGTTTGGCGGCCCCACGGGTCA
GCCCGCCGGCATCGCTGGCCGCGCTCTGCTCAAGCGATCTCGTCGATCGGGCCGGACACGCGCGCGGCAAAGCGTATCGC
GACATCGCACGCAACCTGCAGGGCCAGCTCGACCACCTGCCCGACCTCATCGCCCGACCCCGCAGCGAGCAGGACGTGAT
CGACGTGCTGGATTGGTGTGCGCGCGAGGGGATTGCGGTCATCCCATACGGTGGTGGCAGCTCGGTGGTTGGCGGTGTCG
AGCCGCGCTTCGATGAGCCGGTGGTCACGGTCGACGTCACTGCCATGAGCGCGGTGCTTGAGATTGACCGTGTCAGCCGT
GCCGCGCGCATCCAGGCGGGTGCGTTCGGCCCCTCGATCGAGCATCAGCTTCGCCCACACGATTTGACACTGCGCCATTT
CCCGCAGTCCTTCGGCTTCTCGACTCTCGGTGGCTGGTTGGCCACCCGCTCCGGCGGACACTTCGCCACGCTCTATACCC
ATATCGACGACTTGACCGAATCGCTGCGGATTGTCACCCCGGTGGGGATCAGCGAGTCCCGGCGGCTGCCCGGAAGCGGT
GCCGGACCATCCCCGGACCGGTTGTTCCTCGGGTCCGAGGGGACGCTTGGCATCATCACCGAGGCGTGGATGCGGCTGCA
ACACCGTCCGCGATGGCAGGTCACGGTGTCCGTGGTGTTTGACGACTGGGCCGCCGCGGTCGCCGCGACCCGGACGATCG
CTCAGGCGGGGCTGTACCCGGCCAACTGCCGGCTGTTGGATCCGGCCGAGGCGTTGCTGAATGCCGGCACGTCCGTTGGT
GGCGGGCTGTTGGTGTTGGCGTTCGAGTCTGCCGACCACCCGATAGACCCGTGGCTGCACCGGGCGGTGGCGATCACCGC
CGAACACGGCGGCACGGTGACCGCGCAACGTAGCCGCGGAACTACAAGCGACGCAACGGAACACAACGCAGCCGCGAACT
GGCGCTCGGCGTTTCTGCGCATGCCGTATCAACGAGACGCGCTGGTTCGCCGCGGAGTTATCGCCGAAACATTCGAAACC
GCTTGCACCTGGGACGGATTCGATACTCTACATGCCGCGGTGACCGATGCCGCTCGGACCGCGATCTGGAAGGTATGCGG
GACCGGAGTAGTGACCTGTCGATTCACCCATGTCTACCCGGACGGCCCGGCTCCTTACTACGGCATCTATGCCGGCGGGC
GCTGGGGGTCGCTCGACGCGCAGTGGGACGAGATCAAGGCTGCCGTGTCCGAGGCGATCAGCGCCAGTGGCGGTACCATC
ACCCACCACCATGCGGTCGGTCGCGACCACCGCGCTTGGTATGACCGGCAGCGTCCCGACCCGTTCGCGGCGGCCCTGCG
GGCGGCGAAGTCCGCACTCGACCCGGCCGGGATCCTCAACCCAGGGGTGTTGCTCGGTCGCTGA

Upstream 100 bases:

>100_bases
ATGTGGTGGCTAGCCGGTGCTGGATGGGCTATCGTCGCGGCCCTGGTGCTGGTGGTCGTCGGCGGAGCCATGATCGTCCT
CAAACGCTGACACCATCAGC

Downstream 100 bases:

>100_bases
TCAGCCGAGCCCAATCCGCAACAGCTCGGCCAGGCTGGCCAACTTGACCCGGGGACGCCCGTGCGGCTCGCCGGCGGCCC
GCTCGAAAGCGTCGATCACC

Product: alkyldihydroxyacetonephosphate synthase agpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MRSWWGWGTVEDALSDQETQALQSRVAALVSGHDLSDHPPPDLTALGLAAPRVSPPASLAALCSSDLVDRAGHARGKAYR
DIARNLQGQLDHLPDLIARPRSEQDVIDVLDWCAREGIAVIPYGGGSSVVGGVEPRFDEPVVTVDVTAMSAVLEIDRVSR
AARIQAGAFGPSIEHQLRPHDLTLRHFPQSFGFSTLGGWLATRSGGHFATLYTHIDDLTESLRIVTPVGISESRRLPGSG
AGPSPDRLFLGSEGTLGIITEAWMRLQHRPRWQVTVSVVFDDWAAAVAATRTIAQAGLYPANCRLLDPAEALLNAGTSVG
GGLLVLAFESADHPIDPWLHRAVAITAEHGGTVTAQRSRGTTSDATEHNAAANWRSAFLRMPYQRDALVRRGVIAETFET
ACTWDGFDTLHAAVTDAARTAIWKVCGTGVVTCRFTHVYPDGPAPYYGIYAGGRWGSLDAQWDEIKAAVSEAISASGGTI
THHHAVGRDHRAWYDRQRPDPFAAALRAAKSALDPAGILNPGVLLGR

Sequences:

>Translated_527_residues
MRSWWGWGTVEDALSDQETQALQSRVAALVSGHDLSDHPPPDLTALGLAAPRVSPPASLAALCSSDLVDRAGHARGKAYR
DIARNLQGQLDHLPDLIARPRSEQDVIDVLDWCAREGIAVIPYGGGSSVVGGVEPRFDEPVVTVDVTAMSAVLEIDRVSR
AARIQAGAFGPSIEHQLRPHDLTLRHFPQSFGFSTLGGWLATRSGGHFATLYTHIDDLTESLRIVTPVGISESRRLPGSG
AGPSPDRLFLGSEGTLGIITEAWMRLQHRPRWQVTVSVVFDDWAAAVAATRTIAQAGLYPANCRLLDPAEALLNAGTSVG
GGLLVLAFESADHPIDPWLHRAVAITAEHGGTVTAQRSRGTTSDATEHNAAANWRSAFLRMPYQRDALVRRGVIAETFET
ACTWDGFDTLHAAVTDAARTAIWKVCGTGVVTCRFTHVYPDGPAPYYGIYAGGRWGSLDAQWDEIKAAVSEAISASGGTI
THHHAVGRDHRAWYDRQRPDPFAAALRAAKSALDPAGILNPGVLLGR
>Mature_527_residues
MRSWWGWGTVEDALSDQETQALQSRVAALVSGHDLSDHPPPDLTALGLAAPRVSPPASLAALCSSDLVDRAGHARGKAYR
DIARNLQGQLDHLPDLIARPRSEQDVIDVLDWCAREGIAVIPYGGGSSVVGGVEPRFDEPVVTVDVTAMSAVLEIDRVSR
AARIQAGAFGPSIEHQLRPHDLTLRHFPQSFGFSTLGGWLATRSGGHFATLYTHIDDLTESLRIVTPVGISESRRLPGSG
AGPSPDRLFLGSEGTLGIITEAWMRLQHRPRWQVTVSVVFDDWAAAVAATRTIAQAGLYPANCRLLDPAEALLNAGTSVG
GGLLVLAFESADHPIDPWLHRAVAITAEHGGTVTAQRSRGTTSDATEHNAAANWRSAFLRMPYQRDALVRRGVIAETFET
ACTWDGFDTLHAAVTDAARTAIWKVCGTGVVTCRFTHVYPDGPAPYYGIYAGGRWGSLDAQWDEIKAAVSEAISASGGTI
THHHAVGRDHRAWYDRQRPDPFAAALRAAKSALDPAGILNPGVLLGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI4501993, Length=503, Percent_Identity=29.0258449304175, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI37595756, Length=454, Percent_Identity=26.431718061674, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI119964728, Length=188, Percent_Identity=30.3191489361702, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI48994907, Length=442, Percent_Identity=25.3393665158371, Blast_Score=136, Evalue=4e-33,
Organism=Escherichia coli, GI1789351, Length=447, Percent_Identity=25.0559284116331, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17556096, Length=570, Percent_Identity=27.8947368421053, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI17534361, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6320027, Length=229, Percent_Identity=30.1310043668122, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6320023, Length=220, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6320764, Length=249, Percent_Identity=27.3092369477912, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24653753, Length=486, Percent_Identity=27.9835390946502, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI18921117, Length=444, Percent_Identity=23.8738738738739, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24639277, Length=444, Percent_Identity=23.8738738738739, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24639275, Length=444, Percent_Identity=23.8738738738739, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 56521; Mature: 56521

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSWWGWGTVEDALSDQETQALQSRVAALVSGHDLSDHPPPDLTALGLAAPRVSPPASLA
CCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCHHHHH
ALCSSDLVDRAGHARGKAYRDIARNLQGQLDHLPDLIARPRSEQDVIDVLDWCAREGIAV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEE
IPYGGGSSVVGGVEPRFDEPVVTVDVTAMSAVLEIDRVSRAARIQAGAFGPSIEHQLRPH
EEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
DLTLRHFPQSFGFSTLGGWLATRSGGHFATLYTHIDDLTESLRIVTPVGISESRRLPGSG
CCHHHHCCHHCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
AGPSPDRLFLGSEGTLGIITEAWMRLQHRPRWQVTVSVVFDDWAAAVAATRTIAQAGLYP
CCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHHHCCCC
ANCRLLDPAEALLNAGTSVGGGLLVLAFESADHPIDPWLHRAVAITAEHGGTVTAQRSRG
CCCEEECHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHEEEEEECCCCEEEEECCCC
TTSDATEHNAAANWRSAFLRMPYQRDALVRRGVIAETFETACTWDGFDTLHAAVTDAART
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIWKVCGTGVVTCRFTHVYPDGPAPYYGIYAGGRWGSLDAQWDEIKAAVSEAISASGGTI
HHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEE
THHHAVGRDHRAWYDRQRPDPFAAALRAAKSALDPAGILNPGVLLGR
EEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSWWGWGTVEDALSDQETQALQSRVAALVSGHDLSDHPPPDLTALGLAAPRVSPPASLA
CCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCHHHHH
ALCSSDLVDRAGHARGKAYRDIARNLQGQLDHLPDLIARPRSEQDVIDVLDWCAREGIAV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEE
IPYGGGSSVVGGVEPRFDEPVVTVDVTAMSAVLEIDRVSRAARIQAGAFGPSIEHQLRPH
EEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
DLTLRHFPQSFGFSTLGGWLATRSGGHFATLYTHIDDLTESLRIVTPVGISESRRLPGSG
CCHHHHCCHHCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
AGPSPDRLFLGSEGTLGIITEAWMRLQHRPRWQVTVSVVFDDWAAAVAATRTIAQAGLYP
CCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHHHCCCC
ANCRLLDPAEALLNAGTSVGGGLLVLAFESADHPIDPWLHRAVAITAEHGGTVTAQRSRG
CCCEEECHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHEEEEEECCCCEEEEECCCC
TTSDATEHNAAANWRSAFLRMPYQRDALVRRGVIAETFETACTWDGFDTLHAAVTDAART
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIWKVCGTGVVTCRFTHVYPDGPAPYYGIYAGGRWGSLDAQWDEIKAAVSEAISASGGTI
HHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEE
THHHAVGRDHRAWYDRQRPDPFAAALRAAKSALDPAGILNPGVLLGR
EEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]