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The map label for this gene is ykuT [H]

Identifier: 148824296

GI number: 148824296

Start: 3483616

End: 3484542

Strand: Reverse

Name: ykuT [H]

Synonym: TBFG_13121

Alternate gene names: 148824296

Gene position: 3484542-3483616 (Counterclockwise)

Preceding gene: 148824297

Following gene: 148824295

Centisome position: 78.76

GC content: 65.91

Gene sequence:

>927_bases
ATGACGACTAGCGGCACAGTTCTGGCCACCTCGATAGCACAGCACTGGCATAACTTCTGGCGCGGTGAAATCGGCGACTG
GATCCTCAACCGGGGCCTGCGCATCGTCATGCTGCTGATCGCAGCGGTGCTGGCGGCCCGCTTCGTGACTTGGCTTGCCA
ACCGGGTGACCCGGCGCCTCGACCTGGGGTTTACCGAAAGCGACGCGTTGGTGCGCTCGGAGGCAACCAAGCACCGCCAG
GCCGTAGCGTCGGTGATCTCGTGGGTGTCGATCGTCCTCATCTATGTCGTCGTTGTGTACGAGGTCATCGATGTGTTGCC
GGTTCCGGTCGGTGCGTTGGTGGGGCCGGCGGCGGTGCTCGGCGCCGCGCTGGGCTTCGGTGCCCAACGCCTGGTGCAGG
ACCTACTCGCCGGGTTCTTCATCATCGTGGAGAAGCAGTACGGGTTCGGCGATTTGGTCGAACTCAGCATGGTGGGGTCA
CCGGAGAACGCGGCCGGCACGGTGGAGGACGTCACGCTGCGGGTGACCAAGCTGCGTTCCAGCGAGGGTGAGGTGTTCAC
CGTTCCCAACGGGAACATCGTCAAGTCGGTCAACCTGTCCAAGGACTGGGCCCGCGCGGTCGTGGACATCCCCGTCCCGA
CCAGCGCCGATCTCGGCCGCGTGAACGAGGTCTTGCATCAGGAGTGTGAGCACGCGCGCCACGACTCGCTGCTGGGAGAG
CTGTTGTTGGATGAGCCCACGGTCATGGGCGTGGAGCGCATCGAAGTGGACACCGTCACCCTGCGACTGGTGGCCCGCAC
CCTACCCGGCAAGCAGTTCGAGGCGGGCCGGCAGTTGCGGGTGCTGGTGATCCGCGCGCTCACCCGCGCCGGGATAGTCA
CCGCGGCCGATGCGCGGGCCGCGGTGGCAGAAAGTCCGGAGCAGTAG

Upstream 100 bases:

>100_bases
GATCTGCGCACCGAGTACGAGGTCGGCAATCCGGCGGCCGTTCTGGATGGAGACCTCGACGGATTCCTGGAAGCCGGGAT
CCGGTGGCGCAATCGACGTA

Downstream 100 bases:

>100_bases
CGTGAAGCTCAGCAACCAGAAACGGCACTGGCCGGGCTATCTGTTCGGCCGGATCCGCACGTCGACCCTGGTGTTGATCG
CCGCGTTCCTGGCGGTGTGG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQ
AVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGS
PENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE
LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESPEQ

Sequences:

>Translated_308_residues
MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQ
AVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGS
PENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE
LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESPEQ
>Mature_307_residues
TTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRLDLGFTESDALVRSEATKHRQA
VASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVLGAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSP
ENAAGTVEDVTLRVTKLRSSEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGEL
LLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARAAVAESPEQ

Specific function: May play a role in resistance to osmotic downshock [H]

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI87081787, Length=283, Percent_Identity=27.9151943462898, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 33381; Mature: 33250

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS
HHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC
SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE
CCCCEEECCCCCEEEEECCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCEEECCHHH
AVAESPEQ
HHHCCCCC
>Mature Secondary Structure 
TTSGTVLATSIAQHWHNFWRGEIGDWILNRGLRIVMLLIAAVLAARFVTWLANRVTRRL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLGFTESDALVRSEATKHRQAVASVISWVSIVLIYVVVVYEVIDVLPVPVGALVGPAAVL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GAALGFGAQRLVQDLLAGFFIIVEKQYGFGDLVELSMVGSPENAAGTVEDVTLRVTKLRS
HHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC
SEGEVFTVPNGNIVKSVNLSKDWARAVVDIPVPTSADLGRVNEVLHQECEHARHDSLLGE
CCCCEEECCCCCEEEEECCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLLDEPTVMGVERIEVDTVTLRLVARTLPGKQFEAGRQLRVLVIRALTRAGIVTAADARA
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCEEECCHHH
AVAESPEQ
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]