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The map label for this gene is nrdI

Identifier: 148824243

GI number: 148824243

Start: 3425942

End: 3426394

Strand: Reverse

Name: nrdI

Synonym: TBFG_13068

Alternate gene names: 148824243

Gene position: 3426394-3425942 (Counterclockwise)

Preceding gene: 148824244

Following gene: 148824242

Centisome position: 77.44

GC content: 61.59

Gene sequence:

>453_bases
ATGGATATCGCGGGGCGCAGCCTGGTCTATTTCTCCAGCGTGTCGGAGAACACCCACCGCTTTGTGCAGAAACTGGGTAT
TCCCGCCACGCGGATACCGCTGCATGGCCGGATCGAGGTCGACGAGCCGTACGTGCTGATACTGCCCACCTACGGTGGCG
GCCGGGCCAACCCGGGTCTCGATGCCGGCGGATACGTCCCCAAACAGGTCATTGCCTTCTTGAACAACGACCACAATCGA
GCGCAGCTGCGCGGGGTCATCGCTGCCGGCAATACCAACTTCGGTGCCGAGTTCTGCTACGCCGGCGACGTCGTCTCCCG
AAAATGTAGCGTTCCCTACCTATACCGCTTCGAACTGATGGGCACCGAGGACGACGTCGCCGCCGTCCGCACCGGTCTCG
CTGAATTCTGGAAGGAACAGACGTGCCACCAACCGTCATTGCAGAGCCTGTAG

Upstream 100 bases:

>100_bases
GACCACTGGTCGGGTTTCCGCCCCGATCGCATCAAGGCGCTCGCCGGGGCAGCGCTGACCGCCTAGCGCGGCAGACATAG
ATAAGGAAGATTGCGGTGCC

Downstream 100 bases:

>100_bases
CCTCCGGCGCGCACGCCTCTTACTCTGGGGGGCCGGGCGAAACGGACTATCACGCGCTGAACGCGATGCTGAACCTGTAC
GACGCGGACGGCAAGATCCA

Product: ribonucleotide reductase stimulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGLDAGGYVPKQVIAFLNNDHNR
AQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELMGTEDDVAAVRTGLAEFWKEQTCHQPSLQSL

Sequences:

>Translated_150_residues
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGLDAGGYVPKQVIAFLNNDHNR
AQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELMGTEDDVAAVRTGLAEFWKEQTCHQPSLQSL
>Mature_150_residues
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGLDAGGYVPKQVIAFLNNDHNR
AQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELMGTEDDVAAVRTGLAEFWKEQTCHQPSLQSL

Specific function: Probably involved in ribonucleotide reductase function

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family

Homologues:

Organism=Escherichia coli, GI1789029, Length=136, Percent_Identity=61.7647058823529, Blast_Score=178, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDI_MYCBO (P65549)

Other databases:

- EMBL:   BX248344
- RefSeq:   NP_856723.1
- ProteinModelPortal:   P65549
- SMR:   P65549
- EnsemblBacteria:   EBMYCT00000015811
- GeneID:   1093564
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb3078c
- GeneTree:   EBGT00050000017490
- HOGENOM:   HBG697191
- OMA:   FELMGTA
- ProtClustDB:   PRK03600
- BioCyc:   MBOV233413:MB3078C-MONOMER
- HAMAP:   MF_00128
- InterPro:   IPR020852
- InterPro:   IPR004465
- PIRSF:   PIRSF005087
- TIGRFAMs:   TIGR00333

Pfam domain/function: PF07972 Flavodoxin_NdrI

EC number: NA

Molecular weight: Translated: 16491; Mature: 16491

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGL
CCCCCCEEEEEECCCHHHHHHHHHHCCCEEECCCCCEEEECCCEEEEEECCCCCCCCCCC
DAGGYVPKQVIAFLNNDHNRAQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELM
CCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEECCHHHCCCCCCEEEEEEEE
GTEDDVAAVRTGLAEFWKEQTCHQPSLQSL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGL
CCCCCCEEEEEECCCHHHHHHHHHHCCCEEECCCCCEEEECCCEEEEEECCCCCCCCCCC
DAGGYVPKQVIAFLNNDHNRAQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELM
CCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEECCHHHCCCCCCEEEEEEEE
GTEDDVAAVRTGLAEFWKEQTCHQPSLQSL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972