Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is esxR
Identifier: 148824210
GI number: 148824210
Start: 3390420
End: 3390710
Strand: Reverse
Name: esxR
Synonym: TBFG_13035
Alternate gene names: 148824210
Gene position: 3390710-3390420 (Counterclockwise)
Preceding gene: 148824211
Following gene: 148824209
Centisome position: 76.64
GC content: 61.51
Gene sequence:
>291_bases ATGTCGCAGATTATGTACAACTATCCGGCGATGATGGCTCATGCCGGGGACATGGCCGGTTATGCGGGCACGCTGCAGAG CTTGGGGGCCGATATCGCCAGTGAGCAGGCCGTGCTGTCCAGTGCTTGGCAGGGTGATACCGGGATCACGTATCAGGGCT GGCAGACCCAGTGGAACCAGGCCCTAGAGGATCTGGTGCGGGCCTATCAGTCGATGTCTGGCACCCATGAGTCCAACACC ATGGCGATGTTGGCTCGAGATGGGGCCGAAGCCGCCAAGTGGGGCGGCTAG
Upstream 100 bases:
>100_bases GGTGAGGCCGCGGGCACGTATGTGGCCGCCGATGCCGCCGCCGCGTCCAGCTACACCGGGTTTTAAAAAAGTCGCTGCTC GGAATGAAAAGGGGTTTGTG
Downstream 100 bases:
>100_bases CACACGGCGCGGGCGTGGTCGGCGACGCCGGGATGATCGGTGGGTTTGATGGGCCCCCATCCGAATGCCGTTGCGCTGTT GGTGGATCCGGTAGCCGATG
Product: EsxR-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSQIMYNYPAMMAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQALEDLVRAYQSMSGTHESNT MAMLARDGAEAAKWGG
Sequences:
>Translated_96_residues MSQIMYNYPAMMAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQALEDLVRAYQSMSGTHESNT MAMLARDGAEAAKWGG >Mature_95_residues SQIMYNYPAMMAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQALEDLVRAYQSMSGTHESNTM AMLARDGAEAAKWGG
Specific function: Unknown
COG id: COG4842
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ESAT-6 (esx) family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ESXR_MYCBO (P64094)
Other databases:
- EMBL: BX248344 - RefSeq: NP_856690.1 - ProteinModelPortal: P64094 - SMR: P64094 - EnsemblBacteria: EBMYCT00000017504 - GeneID: 1093102 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb3045c - GeneTree: EBGT00050000016281 - HOGENOM: HBG565735 - OMA: LQAVWHG - ProtClustDB: CLSK790405 - BioCyc: MBOV233413:MB3045C-MONOMER - InterPro: IPR010310
Pfam domain/function: PF06013 WXG100
EC number: NA
Molecular weight: Translated: 10313; Mature: 10181
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIMYNYPAMMAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQ CCCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH ALEDLVRAYQSMSGTHESNTMAMLARDGAEAAKWGG HHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCC >Mature Secondary Structure SQIMYNYPAMMAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQ CCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH ALEDLVRAYQSMSGTHESNTMAMLARDGAEAAKWGG HHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972