Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148823793
Identifier: 148823793
GI number: 148823793
Start: 2940794
End: 2941225
Strand: Direct
Name: 148823793
Synonym: TBFG_12618
Alternate gene names: NA
Gene position: 2940794-2941225 (Clockwise)
Preceding gene: 148823792
Following gene: 148823794
Centisome position: 66.47
GC content: 63.89
Gene sequence:
>432_bases ATGAGCCGCAACCGCCTGTTCCTGGTTGCCGGCAGCTTGGCGGTTGCCGCCGCCGTGTCCTTGATCTCTGGAATCACGCT GCTGAACAGGGACGTTGGCTCGTATATCGCCTCGCACTATCGCCAAGAATCCCGTGACGTGAACGGAACGCGATACCTGT GCACCGGATCGCCCAAACAGGTGGCCACCACGCTCGTCAAGTACCAGACCCCGGCGGCGCGCGCGTCGCATACCGACACC GAGTACCTGCGTTACCGCAACAACATCGTGACGGTCGGACCCGACGGCACCTATCCGTGCATCATCCGCGTCGAAAACCT CAGCGCCGGATATAACCACGGCGCATATGTCTTCCTGGGCCCTGGATTCACCCCTGGGTCCCCGTCGGGCGGTTCGGGGG GCAGCCCGGGCGGTCCTGGCGGCAGCAAGTAA
Upstream 100 bases:
>100_bases CCGCCGAACCCGATGGAACCGGGTGGCGTTGGCGGACTTGGCATCTGTACCCGAGCGCGTCCGGCGGGACGGTGGTCCAC ACGACGAGCCGATGGCGTCC
Downstream 100 bases:
>100_bases GGCGATGACGCAAAGGAGAGAGTCATGTATCAGGCCGGAGTCGATTTCGGGACCATCAGCCTTACCCCGATCCTGCATGG GGTGGTGGCCACCGTCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASHTDT EYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLGPGFTPGSPSGGSGGSPGGPGGSK
Sequences:
>Translated_143_residues MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASHTDT EYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLGPGFTPGSPSGGSGGSPGGPGGSK >Mature_142_residues SRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASHTDTE YLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLGPGFTPGSPSGGSGGSPGGPGGSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2599_MYCTU (Q50622)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: F70727 - RefSeq: NP_217115.1 - RefSeq: NP_337175.1 - EnsemblBacteria: EBMYCT00000002419 - EnsemblBacteria: EBMYCT00000071508 - GeneID: 887832 - GeneID: 925637 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2674 - KEGG: mtu:Rv2599 - TIGR: MT2674 - TubercuList: Rv2599 - GeneTree: EBGT00050000017854 - HOGENOM: HBG565659 - OMA: FNPGSPA - ProtClustDB: CLSK872082
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14955; Mature: 14824
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c26cd10)-;
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG HHHHHHHCCCCCCCCCCCCHHHHEECCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEEC PGFTPGSPSGGSGGSPGGPGGSK CCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure SRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG HHHHHHHCCCCCCCCCCCCHHHHEECCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEEC PGFTPGSPSGGSGGSPGGPGGSK CCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036