Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148823791
Identifier: 148823791
GI number: 148823791
Start: 2939672
End: 2940292
Strand: Direct
Name: 148823791
Synonym: TBFG_12616
Alternate gene names: NA
Gene position: 2939672-2940292 (Clockwise)
Preceding gene: 148823790
Following gene: 148823792
Centisome position: 66.44
GC content: 66.67
Gene sequence:
>621_bases GTGGGAAATCTGCTGGTCGTGATTGCCGTGGCGCTGTTCATCGCCGCCATCGTCGTTCTCGTCGTGGCCATCCGGCGGCC CAAAACACCAGCCACGCCGGGCGGGCGCCGGGATCCGCTGGCCTTCGACGCAATGCCGCAATTCGGCCCCCGCCAACTCG GACCCGGCGCAATTGTCAGCCACGGTGGCATCGACTATGTGGTCCGCGGATCAGTCACCTTTCGCGAGGGTCCCTTCGTG TGGTGGGAACACTTGCTGGAAGGCGGCGACACGCCAACCTGGCTGAGCGTGCAAGAGGACGACGGGCGTCTCGAGCTTGC GATGTGGGTGAAACGCACCGATCTGGGCTTGCAGCCCGGTGGCCAGCACGTGATCGACGGCGTGACGTTTCAGGAGACCG AGCGCGGTCACGCCGGATATACCACCGAGGGCACGACGGGCCTGCCGGCCGGCGGTGAGATGGACTACGTCGACTGCGCC AGTGCCGGTCAGGGGGCCGACGAGTCCATGCTGCTGTCATTCGAGCGCTGGGCACCGGACATGGGATGGGAGATAGCGAC CGGCAAGTCCGTACTGGCCGGCGAGCTCACCGTCTACCCCGCGCCCCCAGTCTCGGCATAG
Upstream 100 bases:
>100_bases CCGTTGTGACCCCCGGTCCCGCGAAAGCTGTTACGTTAAACGGCGCCATCGATATGCGACCGATCGACCAACCGCGGCGC AGCGGTACGAGAGGGTATGC
Downstream 100 bases:
>100_bases GGCCGAATCGGTGCCACTTCATCAGCTCGCCATAGCGCCGGTGGACGTATCAGGGGCATTGCTTGGACTCGTGCTGAACG CACCCGCGCCGCGGCCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFV WWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCA SAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPVSA
Sequences:
>Translated_206_residues MGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFV WWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCA SAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPVSA >Mature_205_residues GNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVW WEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCAS AGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2597_MYCTU (P65029)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: D70727 - RefSeq: NP_217113.1 - RefSeq: NP_337173.1 - EnsemblBacteria: EBMYCT00000000301 - EnsemblBacteria: EBMYCT00000069834 - GeneID: 887679 - GeneID: 925865 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2673 - KEGG: mtu:Rv2597 - TIGR: MT2673 - TubercuList: Rv2597 - GeneTree: EBGT00050000018127 - HOGENOM: HBG429261 - OMA: RWAPDMP - ProtClustDB: CLSK872080
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21943; Mature: 21812
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1a9b2f14)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEE HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG CCCCCEEEECCEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCC GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD CCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHEEEHHHCCCC MGWEIATGKSVLAGELTVYPAPPVSA CCEEEECCCEEEECEEEEECCCCCCH >Mature Secondary Structure GNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEE HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG CCCCCEEEECCEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCC GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD CCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHEEEHHHCCCC MGWEIATGKSVLAGELTVYPAPPVSA CCEEEECCCEEEECEEEEECCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036