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The map label for this gene is ypfJ [C]

Identifier: 148823770

GI number: 148823770

Start: 2912656

End: 2913537

Strand: Direct

Name: ypfJ [C]

Synonym: TBFG_12595

Alternate gene names: 148823770

Gene position: 2912656-2913537 (Clockwise)

Preceding gene: 148823769

Following gene: 148823772

Centisome position: 65.83

GC content: 65.76

Gene sequence:

>882_bases
ATGACCTTCAACGAGGGTGTGCAAATCGATACCAGCACCACGTCGACCTCGGGTAGCGGTGGCGGGCGGCGCTTGGCCAT
CGGGGGCGGCCTCGGTGGGCTACTGGTGGTGGTGGTCGCAATGCTGCTCGGCGTCGATCCCGGTGGCGTGCTGAGCCAAC
AACCTCTCGACACCCGCGACCACGTAGCACCCGGTTTCGACCTGAGCCAGTGCAGAACCGGGGCCGATGCCAACAGGTTC
GTGCAGTGCCGGGTGGTGGCCACCGGTAACTCCGTGGACGCGGTATGGAAACCGCTGTTGCCCGGCTACACCCGCCCACA
CATGCGGCTGTTCAGCGGCCAGGTAGGCACCGGATGCGGACCGGCCAGCAGCGAGGTCGGGCCGTTCTACTGCCCAGTGG
ACAAAACGGCCTACTTCGACACCGACTTCTTCCAGGTGCTGGTCACCCAATTCGGTTCCAGTGGCGGCCCATTCGCGGAA
GAGTATGTGGTGGCCCATGAATACGGCCATCACGTGCAGAACCTGCTGGGGGTGCTCGGCCGCGCTCAGCAGGGTGCGCA
AGGTGCTGCGGGCAGTGGCGTGCGCACGGAGTTGCAGGCGGACTGCTACGCCGGGGTGTGGGCATACTACGCGTCCACCG
TCAAGCAGGAGAGCACCGGTGTGCCTTACCTGGAGCCGTTGAGCGACAAGGACATCCAAGACGCCCTCGCGGCCGCGGCA
GCGGTGGGCGACGACCGTATCCAACAGCAGACGACCGGACGCACCAACCCCGAGACCTGGACGCATGGCTCGGCCGCGCA
ACGGCAGAAGTGGTTCACTGTCGGATACCAGACTGGCGACCCCAACATCTGCGACACCTTTTCCGCCGCGGACCTGGGGT
AG

Upstream 100 bases:

>100_bases
CGCTGCGCCGGTTTCTAAGGAATCTGCGCAGGTATACCGACGCTCGGTTCGCCGCTGCGCAGCAGAGTTAGGCTGGATCG
GCCGATTTCGGGAGCGTGCG

Downstream 100 bases:

>100_bases
GCGAATTACCAGGGACGAGTCGAGCACTGCACGCCGCTGCCGCCGTCCTGCGACACCACCACCTGGCCGTCTACAACAAT
CTCGCAGTGGAACTCCGGAT

Product: glycine rich membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTFNEGVQIDTSTTSTSGSGGGRRLAIGGGLGGLLVVVVAMLLGVDPGGVLSQQPLDTRDHVAPGFDLSQCRTGADANRF
VQCRVVATGNSVDAVWKPLLPGYTRPHMRLFSGQVGTGCGPASSEVGPFYCPVDKTAYFDTDFFQVLVTQFGSSGGPFAE
EYVVAHEYGHHVQNLLGVLGRAQQGAQGAAGSGVRTELQADCYAGVWAYYASTVKQESTGVPYLEPLSDKDIQDALAAAA
AVGDDRIQQQTTGRTNPETWTHGSAAQRQKWFTVGYQTGDPNICDTFSAADLG

Sequences:

>Translated_293_residues
MTFNEGVQIDTSTTSTSGSGGGRRLAIGGGLGGLLVVVVAMLLGVDPGGVLSQQPLDTRDHVAPGFDLSQCRTGADANRF
VQCRVVATGNSVDAVWKPLLPGYTRPHMRLFSGQVGTGCGPASSEVGPFYCPVDKTAYFDTDFFQVLVTQFGSSGGPFAE
EYVVAHEYGHHVQNLLGVLGRAQQGAQGAAGSGVRTELQADCYAGVWAYYASTVKQESTGVPYLEPLSDKDIQDALAAAA
AVGDDRIQQQTTGRTNPETWTHGSAAQRQKWFTVGYQTGDPNICDTFSAADLG
>Mature_292_residues
TFNEGVQIDTSTTSTSGSGGGRRLAIGGGLGGLLVVVVAMLLGVDPGGVLSQQPLDTRDHVAPGFDLSQCRTGADANRFV
QCRVVATGNSVDAVWKPLLPGYTRPHMRLFSGQVGTGCGPASSEVGPFYCPVDKTAYFDTDFFQVLVTQFGSSGGPFAEE
YVVAHEYGHHVQNLLGVLGRAQQGAQGAAGSGVRTELQADCYAGVWAYYASTVKQESTGVPYLEPLSDKDIQDALAAAAA
VGDDRIQQQTTGRTNPETWTHGSAAQRQKWFTVGYQTGDPNICDTFSAADLG

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=267, Percent_Identity=38.2022471910112, Blast_Score=183, Evalue=9e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2575_MYCTU (P65019)

Other databases:

- EMBL:   BX842580
- EMBL:   AE000516
- PIR:   F70724
- RefSeq:   NP_217091.1
- RefSeq:   NP_337150.1
- EnsemblBacteria:   EBMYCT00000000003
- EnsemblBacteria:   EBMYCT00000073076
- GeneID:   888178
- GeneID:   925665
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2651
- KEGG:   mtu:Rv2575
- TIGR:   MT2651
- TubercuList:   Rv2575
- GeneTree:   EBGT00050000016219
- HOGENOM:   HBG321906
- OMA:   HEFGHHI
- ProtClustDB:   CLSK872075
- InterPro:   IPR007343

Pfam domain/function: PF04228 Zn_peptidase

EC number: NA

Molecular weight: Translated: 30806; Mature: 30675

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1be0e340)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNEGVQIDTSTTSTSGSGGGRRLAIGGGLGGLLVVVVAMLLGVDPGGVLSQQPLDTRD
CCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
HVAPGFDLSQCRTGADANRFVQCRVVATGNSVDAVWKPLLPGYTRPHMRLFSGQVGTGCG
CCCCCCCHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCC
PASSEVGPFYCPVDKTAYFDTDFFQVLVTQFGSSGGPFAEEYVVAHEYGHHVQNLLGVLG
CCCCCCCCEECCCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RAQQGAQGAAGSGVRTELQADCYAGVWAYYASTVKQESTGVPYLEPLSDKDIQDALAAAA
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
AVGDDRIQQQTTGRTNPETWTHGSAAQRQKWFTVGYQTGDPNICDTFSAADLG
HHCHHHHHHHHCCCCCCCCCCCCCHHHHCEEEEEEEECCCCCHHCCCCCCCCH
>Mature Secondary Structure 
TFNEGVQIDTSTTSTSGSGGGRRLAIGGGLGGLLVVVVAMLLGVDPGGVLSQQPLDTRD
CCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
HVAPGFDLSQCRTGADANRFVQCRVVATGNSVDAVWKPLLPGYTRPHMRLFSGQVGTGCG
CCCCCCCHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCC
PASSEVGPFYCPVDKTAYFDTDFFQVLVTQFGSSGGPFAEEYVVAHEYGHHVQNLLGVLG
CCCCCCCCEECCCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RAQQGAQGAAGSGVRTELQADCYAGVWAYYASTVKQESTGVPYLEPLSDKDIQDALAAAA
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
AVGDDRIQQQTTGRTNPETWTHGSAAQRQKWFTVGYQTGDPNICDTFSAADLG
HHCHHHHHHHHCCCCCCCCCCCCCHHHHCEEEEEEEECCCCCHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036