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The map label for this gene is yidD [C]

Identifier: 148663789

GI number: 148663789

Start: 4418498

End: 4418860

Strand: Reverse

Name: yidD [C]

Synonym: MRA_3961

Alternate gene names: 148663789

Gene position: 4418860-4418498 (Counterclockwise)

Preceding gene: 148663790

Following gene: 148663788

Centisome position: 99.97

GC content: 60.06

Gene sequence:

>363_bases
GTGAGTCTGTCTAGGCAAAGCTGTGGGCGCGTGGTCCGGGTTACCGGTAGAGCATCAGCGCGGGGGTTGATTTTCGTTAT
CCAGGTCTATCGGCACATGCTTTCGCCGCTACGACCGGCGTCGTGCCGCTTTGTCCCTACCTGTAGTCAGTACGCCGTCG
ATGCGCTCACCGAGTATGGCCTGTTGCGGGGAAGCTGGTTGACCATGATCAGGCTCGCAAAGTGCGGACCATGGCATCGG
GGAGGATGGGATCCGATACCGGAAGGCTTAACGACAGGCCGGAGCTGCCAGACAGACGTCGACGGCGCGAACGACGACTG
GAACCCTGCGTCAAAGCGAGGGGAGCGTGAGTCTTTTGTTTGA

Upstream 100 bases:

>100_bases
TCCGCGCGCTGCCGAGCAGCCGGCATGTCTCCTCGGCTCGGTTGGAGCAGCAACTGCGATGCGGCTTGCGGAGGGCTGTC
GAACTGGCAGGTAGTGATCG

Downstream 100 bases:

>100_bases
TTTCTTCAGTCTCGACTTCATCTACTACCCGGTGTCGTGGATCATGTGGGTTTGGTACCGGCTGTTCGCGTTTGTGCTAG
GACCATCCAACTTCTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSLSRQSCGRVVRVTGRASARGLIFVIQVYRHMLSPLRPASCRFVPTCSQYAVDALTEYGLLRGSWLTMIRLAKCGPWHR
GGWDPIPEGLTTGRSCQTDVDGANDDWNPASKRGERESFV

Sequences:

>Translated_120_residues
MSLSRQSCGRVVRVTGRASARGLIFVIQVYRHMLSPLRPASCRFVPTCSQYAVDALTEYGLLRGSWLTMIRLAKCGPWHR
GGWDPIPEGLTTGRSCQTDVDGANDDWNPASKRGERESFV
>Mature_119_residues
SLSRQSCGRVVRVTGRASARGLIFVIQVYRHMLSPLRPASCRFVPTCSQYAVDALTEYGLLRGSWLTMIRLAKCGPWHRG
GWDPIPEGLTTGRSCQTDVDGANDDWNPASKRGERESFV

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=70, Percent_Identity=51.4285714285714, Blast_Score=82, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3922_MYCTU (P67300)

Other databases:

- EMBL:   BX842584
- EMBL:   AE000516
- PIR:   B70852
- RefSeq:   NP_218439.1
- RefSeq:   NP_338593.1
- EnsemblBacteria:   EBMYCT00000001369
- EnsemblBacteria:   EBMYCT00000070807
- GeneID:   886256
- GeneID:   922501
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT4040.1
- KEGG:   mtu:Rv3922c
- TIGR:   MT4040.1
- TubercuList:   Rv3922c
- GeneTree:   EBGT00050000018245
- HOGENOM:   HBG634291
- OMA:   AYALEAY
- ProtClustDB:   PRK00041
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 13343; Mature: 13212

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSRQSCGRVVRVTGRASARGLIFVIQVYRHMLSPLRPASCRFVPTCSQYAVDALTEYG
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHH
LLRGSWLTMIRLAKCGPWHRGGWDPIPEGLTTGRSCQTDVDGANDDWNPASKRGERESFV
HHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLSRQSCGRVVRVTGRASARGLIFVIQVYRHMLSPLRPASCRFVPTCSQYAVDALTEYG
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHH
LLRGSWLTMIRLAKCGPWHRGGWDPIPEGLTTGRSCQTDVDGANDDWNPASKRGERESFV
HHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036