Definition Mycobacterium tuberculosis H37Ra, complete genome.
Accession NC_009525
Length 4,419,977

Click here to switch to the map view.

The map label for this gene is esxD

Identifier: 148663758

GI number: 148663758

Start: 4382495

End: 4382818

Strand: Reverse

Name: esxD

Synonym: MRA_3930

Alternate gene names: NA

Gene position: 4382818-4382495 (Counterclockwise)

Preceding gene: 148663759

Following gene: 148663757

Centisome position: 99.16

GC content: 60.8

Gene sequence:

>324_bases
GTGGCAGACACAATTCAGGTAACACCGCAGATGCTGCGCAGCACCGCCAACGATATCCAGGCGAATATGGAGCAAGCCAT
GGGAATCGCCAAGGGCTACCTAGCCAACCAGGAAAACGTCATGAACCCCGCCACCTGGTCTGGTACCGGCGTCGTTGCTT
CGCATATGACAGCCACCGAGATCACCAATGAATTGAACAAGGTCCTTACCGGGGGCACGCGCCTGGCCGAGGGCCTCGTG
CAGGCCGCAGCCCTGATGGAGGGACACGAGGCGGACTCGCAGACAGCGTTTCAGGCGCTGTTCGGCGCTAGCCACGGATC
CTGA

Upstream 100 bases:

>100_bases
GCACAGGGTGAATCGACAGGTCCGCAGAGCAGCCATACACTTCGCGTCATGCCCCGATATTTGAGGGGGAACGGCTAACG
GCAGTAAAGGAGAAGGGCCC

Downstream 100 bases:

>100_bases
CCCAACTCGTTTCACGCCTCGGAAAGGAATTTCACATGTCAGATCAAATCACGTATAACCCGGGAGCCGTATCCGACTTC
GCTTCCGACGTGGGCTCGCG

Product: putative esat-6 like protein EsxD

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MADTIQVTPQMLRSTANDIQANMEQAMGIAKGYLANQENVMNPATWSGTGVVASHMTATEITNELNKVLTGGTRLAEGLV
QAAALMEGHEADSQTAFQALFGASHGS

Sequences:

>Translated_107_residues
MADTIQVTPQMLRSTANDIQANMEQAMGIAKGYLANQENVMNPATWSGTGVVASHMTATEITNELNKVLTGGTRLAEGLV
QAAALMEGHEADSQTAFQALFGASHGS
>Mature_106_residues
ADTIQVTPQMLRSTANDIQANMEQAMGIAKGYLANQENVMNPATWSGTGVVASHMTATEITNELNKVLTGGTRLAEGLVQ
AAALMEGHEADSQTAFQALFGASHGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11194; Mature: 11062

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTIQVTPQMLRSTANDIQANMEQAMGIAKGYLANQENVMNPATWSGTGVVASHMTATE
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
ITNELNKVLTGGTRLAEGLVQAAALMEGHEADSQTAFQALFGASHGS
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADTIQVTPQMLRSTANDIQANMEQAMGIAKGYLANQENVMNPATWSGTGVVASHMTATE
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
ITNELNKVLTGGTRLAEGLVQAAALMEGHEADSQTAFQALFGASHGS
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA