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The map label for this gene is ykoG [H]

Identifier: 148663631

GI number: 148663631

Start: 4219526

End: 4220230

Strand: Reverse

Name: ykoG [H]

Synonym: MRA_3803

Alternate gene names: 148663631

Gene position: 4220230-4219526 (Counterclockwise)

Preceding gene: 148663633

Following gene: 148663630

Centisome position: 95.48

GC content: 62.84

Gene sequence:

>705_bases
ATGCGGCGCGCCGATGGCCAACCGGTCACTGTGCTGGTGGTCGACGACGAACCCGTTCTGGCCGAGATGGTGTCCATGGC
ATTGCGGTATGAAGGTTGGAACATCACCACCGCCGGTGACGGATCGTCGGCGATTGCGGCGGCCCGCCGCCAGCGGCCCG
ATGTGGTTGTGCTCGACGTGATGTTGCCTGACATGAGCGGTCTTGACGTGCTGCACAAGTTGCGCAGCGAGAATCCAGGC
CTGCCGGTTCTACTGCTGACGGCCAAGGACGCGGTGGAAGATCGTATAGCTGGGTTGACCGCGGGGGGCGACGACTACGT
CACCAAGCCGTTTAGCATCGAGGAGGTCGTGCTTCGGCTGCGGGCGTTACTGCGTCGCACGGGGGTGACGACAGTCGACA
GCGGTGCCCAGCTAGTGGTCGGAGACTTGGTGCTGGACGAAGACAGCCACGAGGTGATGCGCGCCGGCGAACCGGTGTCG
TTGACGTCCACCGAGTTCGAGCTGCTGCGGTTCATGATGCACAACTCCAAGCGGGTGCTGAGCAAAGCCCAGATTCTGGA
CCGCGTCTGGAGTTACGACTTCGGCGGCCGGTCCAATATCGTGGAGCTGTACATCTCGTACCTGCGCAAAAAGATCGACA
ACGGTCGCGAACCCATGATTCACACGCTGCGCGGCGCCGGCTATGTGCTCAAGCCGGCCCGCTAG

Upstream 100 bases:

>100_bases
GTTTCATAGCGCGCACATAGGATCCGCATGGCGTCTGCTCAGCCGTGTGCGGATACTTGACGCTGTGACGCAGCACCGCA
TCTCGGTTGAGCGTGTCGTA

Downstream 100 bases:

>100_bases
CAGTCCGCGAATTTGGTCGCTTCGGCTGCGGCTCCTGGTCGGACAGGTTGTCGTCCTCGCCGTGGTGTGTGTGGGAATCA
CCGCGGCAACCGAAATGGCG

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDVMLPDMSGLDVLHKLRSENPG
LPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVS
LTSTEFELLRFMMHNSKRVLSKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR

Sequences:

>Translated_234_residues
MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDVMLPDMSGLDVLHKLRSENPG
LPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVS
LTSTEFELLRFMMHNSKRVLSKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR
>Mature_234_residues
MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDVMLPDMSGLDVLHKLRSENPG
LPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVS
LTSTEFELLRFMMHNSKRVLSKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=39.6396396396396, Blast_Score=167, Evalue=4e-43,
Organism=Escherichia coli, GI1786599, Length=221, Percent_Identity=38.9140271493213, Blast_Score=154, Evalue=3e-39,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=37.9464285714286, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=35.4545454545455, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=35.5555555555556, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=33.7899543378995, Blast_Score=130, Evalue=5e-32,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=33.9366515837104, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=30.7017543859649, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=32, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=34.7826086956522, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=30.4545454545455, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787229, Length=234, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=28.695652173913, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=29.9145299145299, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=37.037037037037, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790437, Length=119, Percent_Identity=32.7731092436975, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790299, Length=107, Percent_Identity=33.6448598130841, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788521, Length=120, Percent_Identity=35.8333333333333, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788905, Length=104, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788713, Length=123, Percent_Identity=30.0813008130081, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786838, Length=142, Percent_Identity=31.6901408450704, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI145693157, Length=111, Percent_Identity=29.7297297297297, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25844; Mature: 25844

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDV
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEEEE
MLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRL
ECCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
RALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVL
HHHHHHCCCCEECCCCEEEEEEEEECCCCHHHHHCCCCCEECHHHHHHHHHHHHCHHHHH
SKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCC
>Mature Secondary Structure
MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDV
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEEEE
MLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRL
ECCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
RALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVL
HHHHHHCCCCEECCCCEEEEEEEEECCCCHHHHHCCCCCEECHHHHHHHHHHHHCHHHHH
SKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]