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The map label for this gene is clpS

Identifier: 148661120

GI number: 148661120

Start: 1501971

End: 1502276

Strand: Direct

Name: clpS

Synonym: MRA_1339

Alternate gene names: 148661120

Gene position: 1501971-1502276 (Clockwise)

Preceding gene: 148661117

Following gene: 148661121

Centisome position: 33.98

GC content: 61.44

Gene sequence:

>306_bases
ATGGCTGTTGTGTCAGCGCCCGCCAAGCCAGGTACCACCTGGCAGCGCGAGTCTGCTCCGGTCGACGTGACGGACAGGGC
ATGGGTCACCATCGTGTGGGACGACCCGGTCAACTTGATGAGCTACGTGACTTACGTGTTTCAGAAGTTGTTCGGCTACA
GCGAGCCGCATGCCACCAAGCTGATGTTGCAGGTGCACAACGAAGGTAAGGCGGTGGTGTCCGCGGGCAGCCGAGAGTCC
ATGGAAGTCGACGTGTCCAAGCTGCATGCCGCCGGTTTGTGGGCGACGATGCAGCAGGACCGGTGA

Upstream 100 bases:

>100_bases
GCGGTCCGACGCGGTCCGCAGCGTCGCCCGGTTGGGACCCAGTCGTTCACACCGCCACGGTATCGGCTCGCGGCCACGGT
GCGCTGGGTATCCTGGGGCC

Downstream 100 bases:

>100_bases
GATTCGAGGATATTCGGGATCCATCGTGCGCAGGTGGAAGCGCGTCGAGACCCGCGATGGTCCCCGCTTTCGATCGTCGT
TGGCTCCGCATGAGGCCGCC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRES
MEVDVSKLHAAGLWATMQQDR

Sequences:

>Translated_101_residues
MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRES
MEVDVSKLHAAGLWATMQQDR
>Mature_100_residues
AVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESM
EVDVSKLHAAGLWATMQQDR

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_MYCBO (P67648)

Other databases:

- EMBL:   BX248338
- RefSeq:   NP_855020.1
- ProteinModelPortal:   P67648
- SMR:   P67648
- EnsemblBacteria:   EBMYCT00000018113
- GeneID:   1090658
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb1366
- GeneTree:   EBGT00050000017021
- HOGENOM:   HBG545468
- OMA:   GLWATLQ
- ProtClustDB:   PRK00033
- BioCyc:   MBOV233413:MB1366-MONOMER
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 11222; Mature: 11091

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK
CCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEE
LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR
EEEEECCCCCEEEECCCCCCEEEHHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
AVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK
CEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEE
LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR
EEEEECCCCCEEEECCCCCCEEEHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972