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The map label for this gene is ybbN [C]

Identifier: 148661113

GI number: 148661113

Start: 1488471

End: 1489385

Strand: Direct

Name: ybbN [C]

Synonym: MRA_1332

Alternate gene names: 148661113

Gene position: 1488471-1489385 (Clockwise)

Preceding gene: 148661112

Following gene: 148661117

Centisome position: 33.68

GC content: 65.57

Gene sequence:

>915_bases
GTGACGCGTCCGCGACCCCCGCTCGGGCCGGCCATGGCCGGTGCTGTTGACCTCTCCGGCATCAAACAACGTGCCCAGCA
AAACGCTGCGGCGAGCACGGATGCCGACCGGGCACTGTCGACGCCGTCCGGTGTGACCGAGATCACCGAGGCGAACTTCG
AGGACGAGGTGATCGTCCGGTCCGACGAAGTGCCGGTGGTGGTGTTGCTGTGGTCACCCCGCAGCGAGGTATGCGTCGAC
TTGCTTGACACGCTGTCCGGCTTGGCCGCTGCCGCTAAGGGCAAGTGGTCGCTGGCGTCGGTTAACGTTGACGTCGCACC
CAGGGTGGCACAGATATTCGGCGTCCAAGCGGTTCCGACCGTGGTGGCCTTGGCTGCGGGACAGCCGATCTCGAGCTTCC
AGGGCCTCCAGCCCGCGGACCAACTGAGTCGCTGGGTGGATTCCCTGTTGTCTGCGACAGCCGGAAAGCTCAAGGGCGCA
GCGAGTTCCGAGGAGTCCACCGAAGTCGATCCAGCGGTGGCACAGGCGCGCCAGCAGCTCGAGGATGGCGACTTTGTTGC
CGCGCGCAAGTCATATCAGGCGATTTTGGATGCCAACCCAGGAAGCGTCGAAGCCAAGGCGGCCATCCGCCAGATCGAAT
TCCTCATCCGCGCAACCGCACAACGGCCCGACGCCGTCTCGGTCGCCGACAGCTTGTCGGATGACATCGACGCCGCGTTT
GCGGCAGCCGACGTGCAAGTCCTCAACCAGGATGTGAGTGCGGCCTTCGAGCGCCTGATCGCGTTGGTGCGTCGGACATC
TGGAGAAGAGCGCACCCGGGTGCGCACCCGGCTGATCGAGCTGTTCGAGCTGTTCGACCCCGCCGATCCCGAGGTCGTGG
CCGGTCGGCGCAACCTCGCCAACGCGCTGTACTGA

Upstream 100 bases:

>100_bases
ATCTTGGTCATACCAACCGATCGCGGTATGTCGGCTCCTGCCGCAGGGTCGGCGCCACCGGGTGGATCGATGACCGCAGC
GGCATGACAGACTTGACGGC

Downstream 100 bases:

>100_bases
GGCCGGCTGGCGAGCAGACGCAGAATCGCCTAAACCCGCACGGGTTTAGGCGATTCTGCGTCTGCTCGCGCTGGGCGGCT
ACGACAACCCGGGTGATCCG

Product: thioredoxin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLLWSPRSEVCVD
LLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGA
ASSEESTEVDPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF
AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANALY

Sequences:

>Translated_304_residues
MTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLLWSPRSEVCVD
LLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGA
ASSEESTEVDPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF
AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANALY
>Mature_303_residues
TRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLLWSPRSEVCVDL
LDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAA
SSEESTEVDPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFA
AADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANALY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain

Homologues:

Organism=Escherichia coli, GI87081747, Length=107, Percent_Identity=35.5140186915888, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1324_MYCTU (P64807)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   H70769
- RefSeq:   NP_215840.1
- RefSeq:   NP_335815.1
- ProteinModelPortal:   P64807
- SMR:   P64807
- EnsemblBacteria:   EBMYCT00000001294
- EnsemblBacteria:   EBMYCT00000069586
- GeneID:   886897
- GeneID:   924685
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1366
- KEGG:   mtu:Rv1324
- TIGR:   MT1366
- TubercuList:   Rv1324
- GeneTree:   EBGT00050000014622
- HOGENOM:   HBG544890
- OMA:   WVLAKVD
- ProtClustDB:   CLSK791099
- GO:   GO:0005488
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990
- Gene3D:   G3DSA:3.40.30.10
- Gene3D:   G3DSA:1.25.40.10
- PANTHER:   PTHR10438

Pfam domain/function: PF00085 Thioredoxin; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 32170; Mature: 32039

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS51352 THIOREDOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHCCCCCCEEEE
SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHH
VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL
HHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC
EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHH
NALY
HHCC
>Mature Secondary Structure 
TRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHCCCCCCEEEE
SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHH
VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL
HHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC
EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHH
NALY
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036