| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is pkn1 [H]
Identifier: 148660487
GI number: 148660487
Start: 810052
End: 810951
Strand: Direct
Name: pkn1 [H]
Synonym: MRA_0720
Alternate gene names: 148660487
Gene position: 810052-810951 (Clockwise)
Preceding gene: 148660486
Following gene: 148660488
Centisome position: 18.33
GC content: 67.0
Gene sequence:
>900_bases GTGCTGACCGAGTTGGTTGACCTGCCCGGCGGATCGTTCCGCATGGGCTCGACGCGCTTCTACCCCGAAGAAGCGCCGAT TCATACCGTGACCGTGCGCGCCTTTGCGGTAGAGCGACACCCGGTGACCAACGCGCAATTTGCCGAATTCGTCTCCGCGA CAGGCTATGTGACGGTTGCAGAACAACCCCTTGACCCCGGGCTCTACCCAGGAGTGGACGCAGCAGACCTGTGTCCCGGT GCGATGGTGTTTTGTCCGACGGCCGGGCCGGTCGACCTGCGTGACTGGCGGCAATGGTGGGACTGGGTACCTGGCGCCTG CTGGCGCCATCCGTTTGGCCGGGACAGCGATATCGCCGACCGAGCCGGCCACCCGGTCGTACAGGTGGCCTATCCGGACG CCGTGGCCTACGCACGATGGGCTGGTCGACGCCTACCGACCGAGGCCGAGTGGGAGTACGCGGCCCGTGGCGGAACCACG GCAACCTATGCGTGGGGCGACCAGGAGAAGCCGGGGGGCATGCTCATGGCGAACACCTGGCAGGGCCGGTTTCCTTACCG CAACGACGGTGCATTGGGCTGGGTGGGAACCTCCCCGGTGGGCAGGTTTCCGGCCAACGGGTTTGGCTTGCTCGACATGA TCGGAAACGTTTGGGAGTGGACCACCACCGAGTTCTATCCACACCATCGCATCGATCCACCCTCGACGGCCTGCTGCGCA CCGGTCAAGCTCGCTACAGCCGCCGACCCGACGATCAGCCAGACCCTCAAGGGCGGCTCGCACCTGTGCGCGCCGGAGTA CTGCCACCGCTACCGCCCGGCGGCGCGCTCGCCGCAGTCGCAGGACACCGCGACCACCCATATCGGGTTCCGGTGCGTGG CCGACCCGGTGTCCGGGTAG
Upstream 100 bases:
>100_bases GACCGTTCGAAGATGTGGAATCCGATCTTGCGCTTGCTTTTTCGCGTGACTGAGCGGTCTGCTGTGACGCGGGACGGCGT GGTCGGCATACGCTGAAGTC
Downstream 100 bases:
>100_bases TGCCAACTTCGCATGAGGAACTGCACACCCAGCAGGGCGTCAGTCGGCGCGACGAGTCACTCCCGGGGGCTACGCATGAA TTCGACTACCGGAGCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MLTELVDLPGGSFRMGSTRFYPEEAPIHTVTVRAFAVERHPVTNAQFAEFVSATGYVTVAEQPLDPGLYPGVDAADLCPG AMVFCPTAGPVDLRDWRQWWDWVPGACWRHPFGRDSDIADRAGHPVVQVAYPDAVAYARWAGRRLPTEAEWEYAARGGTT ATYAWGDQEKPGGMLMANTWQGRFPYRNDGALGWVGTSPVGRFPANGFGLLDMIGNVWEWTTTEFYPHHRIDPPSTACCA PVKLATAADPTISQTLKGGSHLCAPEYCHRYRPAARSPQSQDTATTHIGFRCVADPVSG
Sequences:
>Translated_299_residues MLTELVDLPGGSFRMGSTRFYPEEAPIHTVTVRAFAVERHPVTNAQFAEFVSATGYVTVAEQPLDPGLYPGVDAADLCPG AMVFCPTAGPVDLRDWRQWWDWVPGACWRHPFGRDSDIADRAGHPVVQVAYPDAVAYARWAGRRLPTEAEWEYAARGGTT ATYAWGDQEKPGGMLMANTWQGRFPYRNDGALGWVGTSPVGRFPANGFGLLDMIGNVWEWTTTEFYPHHRIDPPSTACCA PVKLATAADPTISQTLKGGSHLCAPEYCHRYRPAARSPQSQDTATTHIGFRCVADPVSG >Mature_299_residues MLTELVDLPGGSFRMGSTRFYPEEAPIHTVTVRAFAVERHPVTNAQFAEFVSATGYVTVAEQPLDPGLYPGVDAADLCPG AMVFCPTAGPVDLRDWRQWWDWVPGACWRHPFGRDSDIADRAGHPVVQVAYPDAVAYARWAGRRLPTEAEWEYAARGGTT ATYAWGDQEKPGGMLMANTWQGRFPYRNDGALGWVGTSPVGRFPANGFGLLDMIGNVWEWTTTEFYPHHRIDPPSTACCA PVKLATAADPTISQTLKGGSHLCAPEYCHRYRPAARSPQSQDTATTHIGFRCVADPVSG
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI38202250, Length=297, Percent_Identity=40.7407407407407, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI257470975, Length=298, Percent_Identity=39.9328859060403, Blast_Score=204, Evalue=6e-53, Organism=Homo sapiens, GI257470977, Length=297, Percent_Identity=39.3939393939394, Blast_Score=204, Evalue=8e-53, Organism=Homo sapiens, GI194248088, Length=299, Percent_Identity=35.7859531772575, Blast_Score=155, Evalue=4e-38, Organism=Homo sapiens, GI194248087, Length=299, Percent_Identity=34.1137123745819, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI226437577, Length=199, Percent_Identity=40.2010050251256, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI194248090, Length=229, Percent_Identity=36.2445414847162, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI20130397, Length=302, Percent_Identity=38.0794701986755, Blast_Score=189, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 32744; Mature: 32744
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTELVDLPGGSFRMGSTRFYPEEAPIHTVTVRAFAVERHPVTNAQFAEFVSATGYVTVA CCCCEEECCCCCEECCCCEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCEEEEE EQPLDPGLYPGVDAADLCPGAMVFCPTAGPVDLRDWRQWWDWVPGACWRHPFGRDSDIAD CCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCHHH RAGHPVVQVAYPDAVAYARWAGRRLPTEAEWEYAARGGTTATYAWGDQEKPGGMLMANTW HCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEECC QGRFPYRNDGALGWVGTSPVGRFPANGFGLLDMIGNVWEWTTTEFYPHHRIDPPSTACCA CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCC PVKLATAADPTISQTLKGGSHLCAPEYCHRYRPAARSPQSQDTATTHIGFRCVADPVSG CEEEECCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEECEEEECCCCCC >Mature Secondary Structure MLTELVDLPGGSFRMGSTRFYPEEAPIHTVTVRAFAVERHPVTNAQFAEFVSATGYVTVA CCCCEEECCCCCEECCCCEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCEEEEE EQPLDPGLYPGVDAADLCPGAMVFCPTAGPVDLRDWRQWWDWVPGACWRHPFGRDSDIAD CCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCHHH RAGHPVVQVAYPDAVAYARWAGRRLPTEAEWEYAARGGTTATYAWGDQEKPGGMLMANTW HCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEECC QGRFPYRNDGALGWVGTSPVGRFPANGFGLLDMIGNVWEWTTTEFYPHHRIDPPSTACCA CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCC PVKLATAADPTISQTLKGGSHLCAPEYCHRYRPAARSPQSQDTATTHIGFRCVADPVSG CEEEECCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEECEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12682364 [H]