| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148660396
Identifier: 148660396
GI number: 148660396
Start: 717974
End: 718369
Strand: Direct
Name: 148660396
Synonym: MRA_0633
Alternate gene names: NA
Gene position: 717974-718369 (Clockwise)
Preceding gene: 148660395
Following gene: 148660398
Centisome position: 16.24
GC content: 64.39
Gene sequence:
>396_bases ATGGTGATCGACACGTCCGCGCTCGTTGCGATGCTCAGCGACGAGCCAGACGCAGAGCGGTTCGAGGCCGCCGTCGAAGC CGACCACATCCGGCTGATGTCGACGGCGTCTTACCTGGAAACGGCACTCGTGATAGAAGCCCGCTTCGGTGAACCGGGCG GACGTGAGCTGGATCTGTGGCTTCATCGCGCCGCGGTCGACCTTGTTGCCGTGCATGCCGACCAAGCGGATGCCGCGCGC GCCGCCTACCGCACGTACGGCAAGGGAAGGCATCGTGCGGGGCTCAACTACGGCGACTGCTTCTCATACGGCCTCGCCAA GATCAGCGGCCAGCCACTCCTGTTCAAGGGCGAAGATTTCCAACACACCGACATCGCCACGGTCGCGCTGCCCTAA
Upstream 100 bases:
>100_bases AGCTTGCCGCGATTCGGCACCGGTGCGCAGCGTTGCCGGTGGTCGACAACCGGTCCGCTGAGGCGATTCTCGGCTATGAC GAGCGCGGATTGCCGGCCTG
Downstream 100 bases:
>100_bases TTCTTAGTCAGCCAGGTGTTCGCCGCACCGGCTTTCGGCAGCGTCAACGGTGTTGTTAAGTGCGGCAGAAGGTTCACAAG GCATGTCGACCGCTCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAAR AAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
Sequences:
>Translated_131_residues MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAAR AAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP >Mature_131_residues MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAAR AAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
Specific function: Unknown
COG id: COG3742
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0110 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y624_MYCTU (P67240)
Other databases:
- EMBL: BX842574 - EMBL: AE000516 - PIR: E70611 - RefSeq: NP_215138.1 - RefSeq: NP_335062.1 - ProteinModelPortal: P67240 - EnsemblBacteria: EBMYCT00000001448 - EnsemblBacteria: EBMYCT00000070564 - GeneID: 887951 - GeneID: 925053 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0652 - KEGG: mtu:Rv0624 - TIGR: MT0652 - TubercuList: Rv0624 - GeneTree: EBGT00050000018412 - HOGENOM: HBG400859 - OMA: CFSYALA - ProtClustDB: CLSK790640 - InterPro: IPR002716
Pfam domain/function: PF01850 PIN
EC number: NA
Molecular weight: Translated: 14250; Mature: 14250
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLW CEECHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHH LHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDF HHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC QHTDIATVALP CCCCEEEEECC >Mature Secondary Structure MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLW CEECHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHH LHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDF HHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC QHTDIATVALP CCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036