Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
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Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is 148660343
Identifier: 148660343
GI number: 148660343
Start: 668562
End: 669704
Strand: Reverse
Name: 148660343
Synonym: MRA_0581
Alternate gene names: NA
Gene position: 669704-668562 (Counterclockwise)
Preceding gene: 148660344
Following gene: 148660342
Centisome position: 15.15
GC content: 64.92
Gene sequence:
>1143_bases GTGGCTGGCAATCCTGATGTGGTGACGGTGCTGCTGGGCGGTGACGTCATGCTCGGCCGTGGCGTCGATCAGATCCTGCC TCATCCCGGCAAACCGCAATTGCGCGAACGGTATATGCGGGATGCGACCGGCTATGTTCGCCTGGCCGAGCGGGTGAACG GGCGCATTCCGCTCCCCGTGGATTGGCGCTGGCCCTGGGGCGAGGCGTTGGCGGTCCTTGAGAACACCGCGACCGACGTC TGTTTGATCAATCTGGAGACGACGATCACCGCCGACGGTGAATTCGCCGACCGCAAACCGGTCTGCTACCGGATGCACCC GGATAACGTGCCGGCGCTGACGGCATTGCGGCCGCACGTGTGCGCGCTGGCCAACAACCACATTCTCGATTTCGGCTACC AGGGGCTGACCGATACGGTCGCGGCTCTCGCCGGTGCGGGGATCCAGAGTGTCGGGGCGGGAGCCGATTTGCTCGCCGCT CGCCGCTCGGCGCTAGTCACGGTTGGCCATGAACGCCGGGTGATCGTCGGCTCGGTAGCGGCGGAATCCAGCGGCGTCCC CGAATCCTGGGCCGCCCGCCGCGACCGGCCCGGAGTGTGGTTGATCCGGGATCCGGCGCAACGCGACGTCGCCGACGATG TGGCGGCACAGGTGCTGGCGGACAAACGCCCCGGCGATATCGCCATAGTCTCGATGCATTGGGGATCCAATTGGGGCTAT GCGACCGCACCCGGCGACGTCGCGTTCGCGCACCGACTGATCGACGCCGGCATCGACATGGTCCACGGACATTCCTCGCA CCATCCGCGGCCAATCGAGATATATCGCGGTAAACCGATCCTGTACGGATGCGGTGACGTCGTTGACGACTACGAAGGCA TCGGCGGGCACGAGTCGTTCCGCAGTGAACTGCGACTGCTGTATCTGACCGTCACCGATCCCGCCAGCGGGAACCTGATC TCGCTGCAGATGCTTCCACTGCGAGTGTCGCGGATGCGCCTACAGCGTGCCTCCCAGACCGACACCGAATGGCTCCGCAA CACCATTGAGCGCATCAGCCGCCGGTTCGGGATTCGAGTCGTGACTCGACCCGACAACCTGCTGGAGGTCGTTCCCGCTG CCAACCTAACGAGCAAGGAGTAA
Upstream 100 bases:
>100_bases GGCCCCACCCACGAGGCCGCCGCCGGCCGATCGTATGACGTGCAATGTACGCCATAGGGTGCGTGTTACGGCGATTACCT GAAGGCGGCGGTGGTCCGGA
Downstream 100 bases:
>100_bases CCGGCAACCATGGCGATCCGCCAACACGTCGGCGCGCTGTTCACCGACCTGTACGAGGTGACGATGGCCCAGGCCTACTG GGCCGAAAGAATGTCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MAGNPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPVDWRWPWGEALAVLENTATDV CLINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHVCALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAA RRSALVTVGHERRVIVGSVAAESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGY ATAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESFRSELRLLYLTVTDPASGNLI SLQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRVVTRPDNLLEVVPAANLTSKE
Sequences:
>Translated_380_residues MAGNPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPVDWRWPWGEALAVLENTATDV CLINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHVCALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAA RRSALVTVGHERRVIVGSVAAESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGY ATAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESFRSELRLLYLTVTDPASGNLI SLQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRVVTRPDNLLEVVPAANLTSKE >Mature_379_residues AGNPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPVDWRWPWGEALAVLENTATDVC LINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHVCALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAAR RSALVTVGHERRVIVGSVAAESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGYA TAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESFRSELRLLYLTVTDPASGNLIS LQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRVVTRPDNLLEVVPAANLTSKE
Specific function: Could be involved in the biosynthesis of a cell wall component (Potential)
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y0574_MYCTU (O53771)
Other databases:
- EMBL: AE000516 - EMBL: BX842573 - PIR: E70933 - RefSeq: NP_215088.1 - RefSeq: NP_335011.1 - ProteinModelPortal: O53771 - EnsemblBacteria: EBMYCT00000002911 - EnsemblBacteria: EBMYCT00000071162 - GeneID: 887721 - GeneID: 924995 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0602 - KEGG: mtu:Rv0574c - TIGR: MT0602 - TubercuList: Rv0574c - GeneTree: EBGT00070000032274 - HOGENOM: HBG491896 - OMA: MTGRGID - ProtClustDB: CLSK871828 - InterPro: IPR019079 - SMART: SM00854
Pfam domain/function: PF09587 PGA_cap
EC number: NA
Molecular weight: Translated: 41548; Mature: 41417
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPV CCCCCCEEEEEECCCEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DWRWPWGEALAVLENTATDVCLINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHV CCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCEEHHCCCHH CALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAARRSALVTVGHERRVIVGSVA HHHCCCCEEECCCCCHHHHHHHHHCCCHHHCCCCHHHHHHCCCEEEEECCCCEEEEEEEE AESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGY CCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE ATAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESF ECCCCHHHHHHHHHHHCCCEECCCCCCCCCCEEEECCCEEEEECCCHHHHHCCCCCHHHH RSELRLLYLTVTDPASGNLISLQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRV HCCEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEE VTRPDNLLEVVPAANLTSKE EECCCCCEEECCCCCCCCCC >Mature Secondary Structure AGNPDVVTVLLGGDVMLGRGVDQILPHPGKPQLRERYMRDATGYVRLAERVNGRIPLPV CCCCCEEEEEECCCEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DWRWPWGEALAVLENTATDVCLINLETTITADGEFADRKPVCYRMHPDNVPALTALRPHV CCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCEEHHCCCHH CALANNHILDFGYQGLTDTVAALAGAGIQSVGAGADLLAARRSALVTVGHERRVIVGSVA HHHCCCCEEECCCCCHHHHHHHHHCCCHHHCCCCHHHHHHCCCEEEEECCCCEEEEEEEE AESSGVPESWAARRDRPGVWLIRDPAQRDVADDVAAQVLADKRPGDIAIVSMHWGSNWGY CCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE ATAPGDVAFAHRLIDAGIDMVHGHSSHHPRPIEIYRGKPILYGCGDVVDDYEGIGGHESF ECCCCHHHHHHHHHHHCCCEECCCCCCCCCCEEEECCCEEEEECCCHHHHHCCCCCHHHH RSELRLLYLTVTDPASGNLISLQMLPLRVSRMRLQRASQTDTEWLRNTIERISRRFGIRV HCCEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEE VTRPDNLLEVVPAANLTSKE EECCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036