Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
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Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is 148660340
Identifier: 148660340
GI number: 148660340
Start: 664797
End: 666128
Strand: Reverse
Name: 148660340
Synonym: MRA_0578
Alternate gene names: NA
Gene position: 666128-664797 (Counterclockwise)
Preceding gene: 148660341
Following gene: 148660335
Centisome position: 15.07
GC content: 66.52
Gene sequence:
>1332_bases ATGAAGCTCTTTGACGATCGTGGCGACGCTGGACGCCAGTTGGCGCAACGCCTGGCGCAGCTATCCGGCAAGGCCGTCGT CGTCCTTGGCTTGCCGCGCGGCGGGGTACCGGTGGCCTTTGAGGTCGCCAAGTCACTGCAAGCGCCACTCGACGTCCTGG TCGTGCGCAAGCTTGGCGTGCCGTTCCAACCCGAATTGGCTTTCGGCGCCATCGGTGAGGACGGCGTGCGGGTGCTCAAC GACGACGTCGTCCGCGGGACACACCTCGATGCTGCCGCCATGGACGCGGTCGAACGCAAGCAGCTGATCGAGCTACAACG CCGCGCGGAACGCTTCCGCCGCGGGCGTGACCGCATCCCGTTGACCGGGCGGATCGCGGTGATCGTCGATGACGGCATCG CCACCGGAGCGACGGCCAAGGCGGCGTGCCAGGTCGCCCGGGCGCACGGTGCGGACAAGGTGGTGCTGGCGGTCCCGATC GGCCCAGACGACATCGTGGCGAGATTCGCCGGGTACGCCGATGAGGTGGTGTGTTTGGCGACGCCGGCGTTGTTCTTCGC CGTCGGGCAGGGTTACCGCAACTTCACCCAGACCTCCGACGACGAGGTGGTGGCGTTTCTGGATCGTGCTCACCGCGACT TCGCCGAGGCAGGTGCGATCGATGCCGCCGCTGACCCACCGCTTCGCGATGAGGAGGTCCAGGTCGTTGCCGGTCCAGTA CCGGTGGCAGGGCACCTGACTGTCCCCGAAAAACCCAGGGGAATTGTGGTTTTCGCACATGGCAGTGGCAGCAGCCGGCA CAGTATCCGCAATCGGTACGTTGCAGAGGTCTTGACCGGGGCCGGGTTTGCGACGCTGTTATTCGACTTGCTCACGCCCG AAGAAGAACGCAACCGCGCCAACGTCTTCGACATTGAGCTGCTCGCTTCCCGACTCATCGACGTGACCGGTTGGTTGGCC ACCCAGCCCGACACCGCATCGCTGCCGGTCGGCTACTTCGGCGCCAGCACGGGAGCGGGTGCGGCGCTGGTCGCGGCCGC CGATCCGCGCGTGAACGTGCGGGCGGTGGTGTCCCGCGGCGGCCGGCCCGATCTCGCGGGTGATTCGCTGGGGAGCGTGG TGGCACCGACGCTGCTGATCGTGGGTGGACGCGACCAGGTGGTCCTCGAGCTGAACCAACGAGCGCAAGCGGTAATACCC GGGAAATGCCAACTCACCGTGGTCCCCGGCGCCACACACCTATTCGAAGAACCAGGCACGCTGGAACAGGTTGCCAAGCT GGCGTGCGATTGGTTCATCGACCACTTGTGCGGCCCAGGCCCAAGCGGCTAA
Upstream 100 bases:
>100_bases CAAGGCGGGATGCGCAATCCGGTCGCTGAGGGACTGTCGTCAGTCGGCCCAGGGACCTAATTCCATATTTGGAGCCATGA GATGGCGACACACTCGGCAG
Downstream 100 bases:
>100_bases ACCGCTAGCCGGCCGGGGTGATCCCTGCGATCCCTGCGCGAGCAGACGCAGAATCGCATCAAAATCGCTGATTTTGTGCG ATTCTGCGTCTGCTCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGVPFQPELAFGAIGEDGVRVLN DDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIPLTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPI GPDDIVARFAGYADEVVCLATPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV PVAGHLTVPEKPRGIVVFAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRANVFDIELLASRLIDVTGWLA TQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRGGRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIP GKCQLTVVPGATHLFEEPGTLEQVAKLACDWFIDHLCGPGPSG
Sequences:
>Translated_443_residues MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGVPFQPELAFGAIGEDGVRVLN DDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIPLTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPI GPDDIVARFAGYADEVVCLATPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV PVAGHLTVPEKPRGIVVFAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRANVFDIELLASRLIDVTGWLA TQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRGGRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIP GKCQLTVVPGATHLFEEPGTLEQVAKLACDWFIDHLCGPGPSG >Mature_443_residues MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGVPFQPELAFGAIGEDGVRVLN DDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIPLTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPI GPDDIVARFAGYADEVVCLATPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV PVAGHLTVPEKPRGIVVFAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRANVFDIELLASRLIDVTGWLA TQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRGGRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIP GKCQLTVVPGATHLFEEPGTLEQVAKLACDWFIDHLCGPGPSG
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y0571_MYCTU (O53768)
Other databases:
- EMBL: BX842573 - EMBL: AE000516 - PIR: B70933 - RefSeq: NP_215085.1 - RefSeq: NP_335006.1 - ProteinModelPortal: O53768 - EnsemblBacteria: EBMYCT00000000534 - EnsemblBacteria: EBMYCT00000070643 - GeneID: 887710 - GeneID: 924989 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0597 - KEGG: mtu:Rv0571c - TIGR: MT0597 - TubercuList: Rv0571c - GeneTree: EBGT00050000015242 - HOGENOM: HBG310173 - OMA: VFDIGLL - ProtClustDB: CLSK871827 - GO: GO:0005829 - InterPro: IPR002925 - InterPro: IPR000836
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran
EC number: NA
Molecular weight: Translated: 46656; Mature: 46656
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGV CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCC PFQPELAFGAIGEDGVRVLNDDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIP CCCCCCEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPIGPDDIVARFAGYADEVVCLA CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHH TPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC PVAGHLTVPEKPRGIVVFAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRA CCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCC NVFDIELLASRLIDVTGWLATQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRG CEEHHHHHHHHHHHHHHCEECCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCC GRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIPGKCQLTVVPGATHLFEEPGT CCCCCCCCCHHHHHHCEEEEECCCCEEEEEECCCCCEECCCCEEEEEECCCHHHHCCCCH LEQVAKLACDWFIDHLCGPGPSG HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGV CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCC PFQPELAFGAIGEDGVRVLNDDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIP CCCCCCEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPIGPDDIVARFAGYADEVVCLA CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHH TPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC PVAGHLTVPEKPRGIVVFAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRA CCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCC NVFDIELLASRLIDVTGWLATQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRG CEEHHHHHHHHHHHHHHCEECCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCC GRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIPGKCQLTVVPGATHLFEEPGT CCCCCCCCCHHHHHHCEEEEECCCCEEEEEECCCCCEECCCCEEEEEECCCHHHHCCCCH LEQVAKLACDWFIDHLCGPGPSG HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036