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The map label for this gene is ybfF [C]

Identifier: 148660308

GI number: 148660308

Start: 633029

End: 633685

Strand: Direct

Name: ybfF [C]

Synonym: MRA_0546

Alternate gene names: 148660308

Gene position: 633029-633685 (Clockwise)

Preceding gene: 148660307

Following gene: 148660309

Centisome position: 14.32

GC content: 70.62

Gene sequence:

>657_bases
ATGGCCGGTGATGCGGTGACGGTGGTGCTGCCCTGTCTCAACGAGGAGGAGTCACTCCCGGCGGTGCTGGCCGCGATCCC
GGCCGGCTATCGGGCGCTAGTGGTGGACAACAACAGCACCGATGACACCGCGACGGTGGCCGCCCGCCACGGTGCCCAGG
TGGTTGTCGAGCCGCGGCCCGGATACGGCTCGGCGGTGCATGCCGGTGTGCTCGCCGCGACCACCCCCATCGTAGCGGTC
ATCGACGCCGACGGCTCGATGGATGCCGGCGACTTGCCCAAGCTGGTCGCCGAACTCGACAAGGGCGCCGACCTGGTGAC
CGGTCGGCGGCGGCCGGTGGCGGGCCTGCACTGGCCATGGGTCGCCCGGGTGGGCACCGTGGTGATGAGCTGGCGGCTGC
GCACCCGCCACCGCCTGCCGGTGCACGACATCGCGCCCATGCGGGTCGCCCGGCGAGAGGCCCTGCTGGATCTGGGCGTT
GTCGATCGACGCTCGGGTTACCCGCTGGAGCTGCTGGTCCGGGCCGCTGCGGCGGGCTGGCGTGTCGTCGAACTCGACGT
CAGTTACGGTCCCCGGACCGGCGGCAAATCCAAGGTCAGCGGTTCGCTGCGGGGCAGCATCATCGCGATCCTGGACTTCT
GGAAGGTGATCTCGTGA

Upstream 100 bases:

>100_bases
CGGCTCCGCAGCCGCCGTCCGGTGGCCGCAACGGCAGCGGCGGGGGCGACTTATTCGGCGGGTTCTGATCACGGTCGCGG
CTTCACTACGGTCGGAGGAC

Downstream 100 bases:

>100_bases
GCTGCCTGCCGGTCAGCGTGCTGGTGGTCGCTAAAGCGCCGGAGCCGGGCCGGGTCAAGACCCGGCTGGCCGCGGCGATT
GGCGATAAGGTCGCCGCCGA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAGDAVTVVLPCLNEEESLPAVLAAIPAGYRALVVDNNSTDDTATVAARHGAQVVVEPRPGYGSAVHAGVLAATTPIVAV
IDADGSMDAGDLPKLVAELDKGADLVTGRRRPVAGLHWPWVARVGTVVMSWRLRTRHRLPVHDIAPMRVARREALLDLGV
VDRRSGYPLELLVRAAAAGWRVVELDVSYGPRTGGKSKVSGSLRGSIIAILDFWKVIS

Sequences:

>Translated_218_residues
MAGDAVTVVLPCLNEEESLPAVLAAIPAGYRALVVDNNSTDDTATVAARHGAQVVVEPRPGYGSAVHAGVLAATTPIVAV
IDADGSMDAGDLPKLVAELDKGADLVTGRRRPVAGLHWPWVARVGTVVMSWRLRTRHRLPVHDIAPMRVARREALLDLGV
VDRRSGYPLELLVRAAAAGWRVVELDVSYGPRTGGKSKVSGSLRGSIIAILDFWKVIS
>Mature_217_residues
AGDAVTVVLPCLNEEESLPAVLAAIPAGYRALVVDNNSTDDTATVAARHGAQVVVEPRPGYGSAVHAGVLAATTPIVAVI
DADGSMDAGDLPKLVAELDKGADLVTGRRRPVAGLHWPWVARVGTVVMSWRLRTRHRLPVHDIAPMRVARREALLDLGVV
DRRSGYPLELLVRAAAAGWRVVELDVSYGPRTGGKSKVSGSLRGSIIAILDFWKVIS

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

Organism=Escherichia coli, GI1788588, Length=211, Percent_Identity=25.1184834123223, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y539_MYCTU (P0A597)

Other databases:

- EMBL:   BX842573
- EMBL:   AE000516
- PIR:   F70546
- RefSeq:   NP_215053.1
- RefSeq:   NP_334972.1
- ProteinModelPortal:   P0A597
- EnsemblBacteria:   EBMYCT00000003441
- EnsemblBacteria:   EBMYCT00000070504
- GeneID:   887476
- GeneID:   924870
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT0564
- KEGG:   mtu:Rv0539
- TIGR:   MT0564
- TubercuList:   Rv0539
- GeneTree:   EBGT00050000015644
- HOGENOM:   HBG752660
- OMA:   RSGYPLQ
- ProtClustDB:   CLSK871821
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: NA

Molecular weight: Translated: 23117; Mature: 22986

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDAVTVVLPCLNEEESLPAVLAAIPAGYRALVVDNNSTDDTATVAARHGAQVVVEPRP
CCCCEEEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCCCHHHEEECCCCEEEEECCC
GYGSAVHAGVLAATTPIVAVIDADGSMDAGDLPKLVAELDKGADLVTGRRRPVAGLHWPW
CCCCHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCHH
VARVGTVVMSWRLRTRHRLPVHDIAPMRVARREALLDLGVVDRRSGYPLELLVRAAAAGW
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
RVVELDVSYGPRTGGKSKVSGSLRGSIIAILDFWKVIS
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AGDAVTVVLPCLNEEESLPAVLAAIPAGYRALVVDNNSTDDTATVAARHGAQVVVEPRP
CCCEEEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCCCHHHEEECCCCEEEEECCC
GYGSAVHAGVLAATTPIVAVIDADGSMDAGDLPKLVAELDKGADLVTGRRRPVAGLHWPW
CCCCHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCHH
VARVGTVVMSWRLRTRHRLPVHDIAPMRVARREALLDLGVVDRRSGYPLELLVRAAAAGW
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
RVVELDVSYGPRTGGKSKVSGSLRGSIIAILDFWKVIS
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036