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The map label for this gene is ccsA [H]

Identifier: 148660298

GI number: 148660298

Start: 621201

End: 622175

Strand: Direct

Name: ccsA [H]

Synonym: MRA_0536

Alternate gene names: 148660298

Gene position: 621201-622175 (Clockwise)

Preceding gene: 148660297

Following gene: 148660299

Centisome position: 14.05

GC content: 68.1

Gene sequence:

>975_bases
TTGAACACGCTGCACGTCAACGTCGGCCTGGCCCGCTACTCCGACTGGGCGTTCACCTCGGCCGTGGTGGCGCTGGTGGT
CGCGCTGCTGCTGCTGGCGTTCGAGTTCGCCCAGGTTCGCGGTCGCGGACTCGCGCCGCTGGCCGTGCCGGCCGGATCGG
TGGCCACCGATAGCGCTACCCCTGGGATCGTGGCGGACCAACGGCACCGGCCGTTCGACGAACGCGTCGGGCGGGGCGGG
CTGGCCGTCGCCTATCTGGGCATCGGGCTACTGCTGGCGTGCGTCGTGCTGCGCGGCCTGGCCACCCAGCGGGTGCCGTG
GGGCAACATGTACGAGTTCATCAACCTGACCTGCTTGTCCGGGCTCATCGCCGGCGCGGTCGTGCTGCGCCGTGCGCGAT
ACCGGCCGCTGTGGGTCTTCCTGCTGGTCCCGGTGCTGATCCTGCTCACCGTGTCCGGACGCTGGCTCTACGCCAATGCC
GCCCCGGTGATGCCGGCACTGCAGTCCTACTGGCTGCCCATTCATGTGTCGGTGGTCAGCCTCGGTTCTGGGGTATTCCT
GGTCGCCGGTGTCGCCAGCATCCTGTTCCTTGTGCGCACATCGCGGCTGGGTGAGCCAACCGGTGAAGGCGCGCTGGCGG
GTATGGTGCGGCGGCTCCCCGATGCCCAAACCCTGGACGGAATCGCCTACCGGACCACGATCTTCGCCTTCCCCGTTTTC
GGCTTCGGGGTGATATTCGGTGCCATCTGGGCCGAGGAAGCCTGGGGCCGCTACTGGGGCTGGGACCCCAAGGAGACGGT
GTCCTTCGTCGCGTGGGTGGTGTACGCGGCGTACCTGCACGCGCGGTCAACGGCGGGTTGGCGGGACCGCAAGGCCGCCT
GGATCAATGTCGCCGGCTTCGTGGCCATGGTCTTCAATCTGTTCTTCGTTAACCTGGTGACCGTCGGCCTGCACTCGTAT
GCGGGCGTGGGCTGA

Upstream 100 bases:

>100_bases
GCGCCGAGTTCGAGCGGCTGACCGGGCGGTTGCTGGCGGGTTTTGAGGCGCGGTCCCCGGACATGGCCGAAGCGGCCGCA
GGGACCGGAAGGGACGTCGA

Downstream 100 bases:

>100_bases
CCGTTCGTCTGCAACCGACCCGAGGACCGCAGCAAGGGGGAGTGCTGGTGACCGAGCATCCGAGGACGGGCGTGGGAGCC
CCCGATAGCGGCAACGGCGG

Product: cytochrome c assembly family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNTLHVNVGLARYSDWAFTSAVVALVVALLLLAFEFAQVRGRGLAPLAVPAGSVATDSATPGIVADQRHRPFDERVGRGG
LAVAYLGIGLLLACVVLRGLATQRVPWGNMYEFINLTCLSGLIAGAVVLRRARYRPLWVFLLVPVLILLTVSGRWLYANA
APVMPALQSYWLPIHVSVVSLGSGVFLVAGVASILFLVRTSRLGEPTGEGALAGMVRRLPDAQTLDGIAYRTTIFAFPVF
GFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVVYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHSY
AGVG

Sequences:

>Translated_324_residues
MNTLHVNVGLARYSDWAFTSAVVALVVALLLLAFEFAQVRGRGLAPLAVPAGSVATDSATPGIVADQRHRPFDERVGRGG
LAVAYLGIGLLLACVVLRGLATQRVPWGNMYEFINLTCLSGLIAGAVVLRRARYRPLWVFLLVPVLILLTVSGRWLYANA
APVMPALQSYWLPIHVSVVSLGSGVFLVAGVASILFLVRTSRLGEPTGEGALAGMVRRLPDAQTLDGIAYRTTIFAFPVF
GFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVVYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHSY
AGVG
>Mature_324_residues
MNTLHVNVGLARYSDWAFTSAVVALVVALLLLAFEFAQVRGRGLAPLAVPAGSVATDSATPGIVADQRHRPFDERVGRGG
LAVAYLGIGLLLACVVLRGLATQRVPWGNMYEFINLTCLSGLIAGAVVLRRARYRPLWVFLLVPVLILLTVSGRWLYANA
APVMPALQSYWLPIHVSVVSLGSGVFLVAGVASILFLVRTSRLGEPTGEGALAGMVRRLPDAQTLDGIAYRTTIFAFPVF
GFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVVYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHSY
AGVG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 35053; Mature: 35053

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLHVNVGLARYSDWAFTSAVVALVVALLLLAFEFAQVRGRGLAPLAVPAGSVATDSAT
CCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC
PGIVADQRHRPFDERVGRGGLAVAYLGIGLLLACVVLRGLATQRVPWGNMYEFINLTCLS
CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GLIAGAVVLRRARYRPLWVFLLVPVLILLTVSGRWLYANAAPVMPALQSYWLPIHVSVVS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHEEEEEEH
LGSGVFLVAGVASILFLVRTSRLGEPTGEGALAGMVRRLPDAQTLDGIAYRTTIFAFPVF
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH
GFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVVYAAYLHARSTAGWRDRKAAWINVAGF
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VAMVFNLFFVNLVTVGLHSYAGVG
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTLHVNVGLARYSDWAFTSAVVALVVALLLLAFEFAQVRGRGLAPLAVPAGSVATDSAT
CCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC
PGIVADQRHRPFDERVGRGGLAVAYLGIGLLLACVVLRGLATQRVPWGNMYEFINLTCLS
CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GLIAGAVVLRRARYRPLWVFLLVPVLILLTVSGRWLYANAAPVMPALQSYWLPIHVSVVS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHEEEEEEH
LGSGVFLVAGVASILFLVRTSRLGEPTGEGALAGMVRRLPDAQTLDGIAYRTTIFAFPVF
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH
GFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVVYAAYLHARSTAGWRDRKAAWINVAGF
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VAMVFNLFFVNLVTVGLHSYAGVG
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]