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The map label for this gene is ccdA [H]

Identifier: 148660296

GI number: 148660296

Start: 618803

End: 619582

Strand: Direct

Name: ccdA [H]

Synonym: MRA_0534

Alternate gene names: 148660296

Gene position: 618803-619582 (Clockwise)

Preceding gene: 148660295

Following gene: 148660297

Centisome position: 14.0

GC content: 69.23

Gene sequence:

>780_bases
ATGACCGGGTTCACCGAGATTGCCGCGGTGGGGCCACTGCTGGTGGCGGTGGGGGTATGTCTGCTGGCTGGTCTGGTGTC
GTTCGCCTCACCATGTGTGGTGCCGCTGGTGCCCGGCTACCTGTCGTATCTGGCGGCCGTCGTTGGGGTGGACGAGCAGC
TGCCGGCCGGCGTCGTCAAACCCCCGGTGGCTGCCCGCTGGCGGGTCGCCGGATCGGCGGCGCTGTTCGTGGCGGGGTTC
ACGACGGTGTTCGTGCTGGGCACCGTCGCCGTCTTGGGCATGACCACCACGCTGATCACGAATCAGCTGCTGCTGCAGCG
GGTCGGAGGCGTGCTGATCGTCGTCATGGGCCTGGTGTTCGTGGGGTTCATCGGAGCCCTGCAGCGCCAGGCGAGGTTCA
CGCCGCGCCAGTTGACGAGCGTAGCGGGGGCGCCGGTGCTTGGCGCGGTGTTCGCGCTCGGCTGGACACCGTGCCTGGGG
CCGACGCTGACCGGGGTGATCACCGTTGCCTCGGCCACCGAGGGTGCCAGCGTGGCGCGTGGGATCGTGCTGGTGATTGC
CTATTGCCTGGGGCTGGGGATTCCGTTCGTGCTTTTGGCGTTCGGTTCGGCGTGGGCGGTGGCGGGCCTGGGCTGGCTGC
GCCGGCACACCAGGGCCATCCAGATCTTCGGCGGGGCGCTGCTGATCGCGGTCGGTGCCGCGCTGGTCACCGGGGTGTGG
AACGACGTCGTGTCGTGGCTGCGCGACGCCTTCGTTTCCGACGTGAGGTTGCCGATTTGA

Upstream 100 bases:

>100_bases
CGGCGGTGTTTCTGCGCGAATTGCTGGCTGCGGACCTGCAGCCGGTGGTCGAGCGGGTGGCCGAGGAGGAGCCGTCGGGT
CGGGCTCCGGTGGGGGCGCA

Downstream 100 bases:

>100_bases
GTGGGCAGGGTGCCGCGCAAAAGGCGCGCAACATGTGGCGGTCGTTGACGTCGATGGGCACCGCGCTGGTGCTGCTGTTT
TTGCTCGCGCTGGCTGCCAT

Product: putative cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTGFTEIAAVGPLLVAVGVCLLAGLVSFASPCVVPLVPGYLSYLAAVVGVDEQLPAGVVKPPVAARWRVAGSAALFVAGF
TTVFVLGTVAVLGMTTTLITNQLLLQRVGGVLIVVMGLVFVGFIGALQRQARFTPRQLTSVAGAPVLGAVFALGWTPCLG
PTLTGVITVASATEGASVARGIVLVIAYCLGLGIPFVLLAFGSAWAVAGLGWLRRHTRAIQIFGGALLIAVGAALVTGVW
NDVVSWLRDAFVSDVRLPI

Sequences:

>Translated_259_residues
MTGFTEIAAVGPLLVAVGVCLLAGLVSFASPCVVPLVPGYLSYLAAVVGVDEQLPAGVVKPPVAARWRVAGSAALFVAGF
TTVFVLGTVAVLGMTTTLITNQLLLQRVGGVLIVVMGLVFVGFIGALQRQARFTPRQLTSVAGAPVLGAVFALGWTPCLG
PTLTGVITVASATEGASVARGIVLVIAYCLGLGIPFVLLAFGSAWAVAGLGWLRRHTRAIQIFGGALLIAVGAALVTGVW
NDVVSWLRDAFVSDVRLPI
>Mature_258_residues
TGFTEIAAVGPLLVAVGVCLLAGLVSFASPCVVPLVPGYLSYLAAVVGVDEQLPAGVVKPPVAARWRVAGSAALFVAGFT
TVFVLGTVAVLGMTTTLITNQLLLQRVGGVLIVVMGLVFVGFIGALQRQARFTPRQLTSVAGAPVLGAVFALGWTPCLGP
TLTGVITVASATEGASVARGIVLVIAYCLGLGIPFVLLAFGSAWAVAGLGWLRRHTRAIQIFGGALLIAVGAALVTGVWN
DVVSWLRDAFVSDVRLPI

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 26489; Mature: 26358

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGFTEIAAVGPLLVAVGVCLLAGLVSFASPCVVPLVPGYLSYLAAVVGVDEQLPAGVVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PPVAARWRVAGSAALFVAGFTTVFVLGTVAVLGMTTTLITNQLLLQRVGGVLIVVMGLVF
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGFIGALQRQARFTPRQLTSVAGAPVLGAVFALGWTPCLGPTLTGVITVASATEGASVAR
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHH
GIVLVIAYCLGLGIPFVLLAFGSAWAVAGLGWLRRHTRAIQIFGGALLIAVGAALVTGVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDVVSWLRDAFVSDVRLPI
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]