| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148660266
Identifier: 148660266
GI number: 148660266
Start: 589635
End: 590477
Strand: Direct
Name: 148660266
Synonym: MRA_0505
Alternate gene names: NA
Gene position: 589635-590477 (Clockwise)
Preceding gene: 148660265
Following gene: 148660267
Centisome position: 13.34
GC content: 67.38
Gene sequence:
>843_bases GTGCGCCCAGCAATCAAAGTCGGCTTGTCGACGGCCTCGGTGTACCCGTTGCGGGCCGAGGCCGCGTTCGAGTACGCCGA CAGGCTTGGCTACGACGGGGTCGAGCTGATGGTCTGGGGTGAATCGGTCAGTCAGGACATCGATGCCGTCCGGAAGCTGT CGCGCCGCTACCGCGTGCCGGTGTTGTCGGTGCACGCTCCGTGCCTACTCATCTCGCAGCGGGTGTGGGGCGCCAATCCG ATCCTCAAGTTGGACCGCAGTGTGCGGGCCGCCGAACAACTGGGCGCGCAAACGGTCGTCGTGCATCCGCCTTTCCGCTG GCAACGACGCTACGCCGAAGGGTTCAGCGATCAGGTTGCCGCCCTAGAAGCGGCCAGCACCGTGATGGTGGCCGTTGAAA ACATGTTTCCCTTCCGAGCGGACCGGTTTTTCGGGGCCGGCCAGTCCCGGGAACGGATGCGTAAGCGGGGTGGTGGCCCA GGTCCGGCGATCTCGGCGTTCGCGCCGTCCTACGACCCGCTGGACGGCAACCACGCGCATTACACGCTGGACCTCTCGCA CACCGCGACTGCGGGCACCGACTCGCTGGATATGGCGCGGCGGATGGGCCCAGGGCTGGTGCACCTGCACCTGTGTGACG GCAGCGGCCTGCCCGCCGACGAGCACCTGGTGCCCGGCCGCGGTACCCAGCCGACCGCCGAGGTGTGCCAGATGCTGGCC GGCAGCGGCTTCGTCGGCCACGTCGTGTTGGAGGTGTCCACCTCAAGCGCGCGTTCGGCCAATGAACGCGAATCCATGCT GGCCGAGTCGTTGCAGTTCGCCCGCACTCACCTGCTGCGTTGA
Upstream 100 bases:
>100_bases CGAAGACATCGCCAGTACGTTGATCGCGGTTGCGGTGGGGGCGCTGATTACCCTGGGACCGCTGGCCTTGTTGCAATCGG GCTAGCCGCCACCACACACA
Downstream 100 bases:
>100_bases TATGCCGGGAACACTATGAACGCGTTGTTCACCACGGCGATGGCGCTGCGCCCGCTTGACTCCGATCCCGGCAATCCGGC GTGCCGGGTTTTTGAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRPAIKVGLSTASVYPLRAEAAFEYADRLGYDGVELMVWGESVSQDIDAVRKLSRRYRVPVLSVHAPCLLISQRVWGANP ILKLDRSVRAAEQLGAQTVVVHPPFRWQRRYAEGFSDQVAALEAASTVMVAVENMFPFRADRFFGAGQSRERMRKRGGGP GPAISAFAPSYDPLDGNHAHYTLDLSHTATAGTDSLDMARRMGPGLVHLHLCDGSGLPADEHLVPGRGTQPTAEVCQMLA GSGFVGHVVLEVSTSSARSANERESMLAESLQFARTHLLR
Sequences:
>Translated_280_residues MRPAIKVGLSTASVYPLRAEAAFEYADRLGYDGVELMVWGESVSQDIDAVRKLSRRYRVPVLSVHAPCLLISQRVWGANP ILKLDRSVRAAEQLGAQTVVVHPPFRWQRRYAEGFSDQVAALEAASTVMVAVENMFPFRADRFFGAGQSRERMRKRGGGP GPAISAFAPSYDPLDGNHAHYTLDLSHTATAGTDSLDMARRMGPGLVHLHLCDGSGLPADEHLVPGRGTQPTAEVCQMLA GSGFVGHVVLEVSTSSARSANERESMLAESLQFARTHLLR >Mature_280_residues MRPAIKVGLSTASVYPLRAEAAFEYADRLGYDGVELMVWGESVSQDIDAVRKLSRRYRVPVLSVHAPCLLISQRVWGANP ILKLDRSVRAAEQLGAQTVVVHPPFRWQRRYAEGFSDQVAALEAASTVMVAVENMFPFRADRFFGAGQSRERMRKRGGGP GPAISAFAPSYDPLDGNHAHYTLDLSHTATAGTDSLDMARRMGPGLVHLHLCDGSGLPADEHLVPGRGTQPTAEVCQMLA GSGFVGHVVLEVSTSSARSANERESMLAESLQFARTHLLR
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML2432 and S.coelicolor SCO3347
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y498_MYCTU (P64717)
Other databases:
- EMBL: BX842573 - EMBL: AE000516 - PIR: E70745 - RefSeq: NP_215012.1 - RefSeq: NP_334927.1 - ProteinModelPortal: P64717 - EnsemblBacteria: EBMYCT00000001191 - EnsemblBacteria: EBMYCT00000072618 - GeneID: 887238 - GeneID: 923896 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0518 - KEGG: mtu:Rv0498 - TIGR: MT0518 - TubercuList: Rv0498 - GeneTree: EBGT00050000017045 - HOGENOM: HBG292474 - OMA: VENMYPW - ProtClustDB: CLSK871815 - InterPro: IPR013022 - InterPro: IPR012307 - Gene3D: G3DSA:3.20.20.150
Pfam domain/function: PF01261 AP_endonuc_2; SSF51658 Xyl_isomerase-like_TIM-brl
EC number: NA
Molecular weight: Translated: 30466; Mature: 30466
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAIKVGLSTASVYPLRAEAAFEYADRLGYDGVELMVWGESVSQDIDAVRKLSRRYRVP CCCCEEECCCCCEECCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCC VLSVHAPCLLISQRVWGANPILKLDRSVRAAEQLGAQTVVVHPPFRWQRRYAEGFSDQVA EEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHHHHH ALEAASTVMVAVENMFPFRADRFFGAGQSRERMRKRGGGPGPAISAFAPSYDPLDGNHAH HHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE YTLDLSHTATAGTDSLDMARRMGPGLVHLHLCDGSGLPADEHLVPGRGTQPTAEVCQMLA EEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH GSGFVGHVVLEVSTSSARSANERESMLAESLQFARTHLLR CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRPAIKVGLSTASVYPLRAEAAFEYADRLGYDGVELMVWGESVSQDIDAVRKLSRRYRVP CCCCEEECCCCCEECCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCC VLSVHAPCLLISQRVWGANPILKLDRSVRAAEQLGAQTVVVHPPFRWQRRYAEGFSDQVA EEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHHHHH ALEAASTVMVAVENMFPFRADRFFGAGQSRERMRKRGGGPGPAISAFAPSYDPLDGNHAH HHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE YTLDLSHTATAGTDSLDMARRMGPGLVHLHLCDGSGLPADEHLVPGRGTQPTAEVCQMLA EEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH GSGFVGHVVLEVSTSSARSANERESMLAESLQFARTHLLR CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036