Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
---|---|
Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is PE_PGRS3 [H]
Identifier: 148660045
GI number: 148660045
Start: 337922
End: 340435
Strand: Reverse
Name: PE_PGRS3 [H]
Synonym: MRA_0288
Alternate gene names: 148660045
Gene position: 340435-337922 (Counterclockwise)
Preceding gene: 148660059
Following gene: 148660044
Centisome position: 7.7
GC content: 77.72
Gene sequence:
>2514_bases ATGTCGTTTGTGATTGCGGCGCCAGAGGTTATCGCGGCAGCGGCAACGGATTTAGCCAGTCTCGAGTCGAGCATCGCCGC GGCCAACGCGGCCGCGGCGGCCAACACCACAGCACTGCTGGCCGCGGGTGCCGATGAAGTCTCGACGGCGGTTGCGGCGC TGTTCGGCGCCCACGGCCAGGCCTATCAGGCGCTCAGCGCCCAAGCGCAGGCGTTTCATGCCCAGTTCGTGCAGGCGTTG ACCTCCGGTGGCGGCGCGTACGCCGCCGCCGAGGCCGCCGCCACCTCGCCGCTGCTCGCCCCGATCAACGAGTTCTTCCT GGCGAATACCGGGCGCCCGCTGATCGGCAACGGCACCAACGGCGCCCCCGGCACCGGGGCCAATGGCGGGGACGGCGGCT GGTTAATCGGCAACGGCGGCGCCGGAGGATCCGGCGCGGCCGGCGTCAACGGCGGGGCCGGCGGCAACGGCGGCGCCGGC GGGCTCATCGGCAACGGCGGCGCCGGCGGCGCCGGCGGGAGGGCCAGCACGGGGACCGGCGGCGCCGGCGGCGCCGGCGG GGCCGCCGGCATGCTGTTCGGGGCCGCCGGGGTCGGCGGTCCCGGCGGATTCGCAGCCGCCTTCGGCGCCACCGGCGGCG CCGGCGGGGCCGGCGGAAACGGCGGGCTGTTCGCCGACGGCGGGGTCGGTGGCGCCGGCGGGGCAACCGACGCCGGCACC GGCGGGGCCGGCGGATCCGGCGGAAACGGCGGGCTGTTCGGCGCCGGCGGCACCGGTGGGCCCGGCGGATTCGGCATCTT TGGCGGCGGCGCCGGCGGGGATGGCGGCTCTGGCGGGCTGTTCGGCGCCGGCGGCACCGGCGGTAGTGGCGGGACGAGCA TAATCAACGTCGGCGGGAACGGTGGGGCCGGCGGCGACGCCGGCATGCTCAGCCTCGGTGCCGCCGGCGGCGCCGGCGGC AGCGGCGGATCCAGCCCGGACGGTGGCGGCGGTGCCGGTGGGATCGGAGGCGACGGCGGCACGTTGTTCGGCTCCGGCGG CGCCGGCGGCGTCGGCGGGCTGGGCTTCGACGCCGGCGGGGCGGGCGGCGCCGGCGGAAAGGCGGGTCTGCTCAGCGGGG CGGGCGGTGCCGGCGGCGCCGGCGGCGGGTCCTTCGCGGGCGCCGGCGGAACCGGTGGGGCCGGCGGCGCGCCCGGGCTC GTCGGCAACGCCGGCAACGGCGGCAACGGCGGCGCCAGCGCGAACGGCGCCGGCGCCGCCGGCGGCGCCGGCGGAAGCGG CGTGCTGATCGGCAATGGCGGTAACGGTGGTAGTGGCGGCACTGGCGCACCCGCCGGCACGGCCGGCGCCGGCGGCTTAG GCGGGCAGCTACTAGGTCGAGACGGATTCAACGCCCCCGCCAGCACGCCACTGCACACCCTGCAGCAACAAATCCTCAAC GCGATCAACGAGCCCACCCAAGCCCTCACCGGGCGACCGCTGATCGGCAACGGCGCCAACGGCACTCCGGGGACCGGGGC CGACGGTGGGGCCGGCGGGTGGTTGTTCGGCAACGGCGGCAACGGCGGCCACGGAGCGACCGGCGCCGACGGCGGAGACG GCGGATCCGGCGGGGCCGGCGGAATCCTGTCAGGTATTGGCGGCACCGGCGGGTCCGGCGGCATCGGAACGACGGGCCAA GGCGGGACCGGCGGGACCGGCGGAGCCGCCTTGCTGATCGGCTCCGGCGGCACCGGCGGCAGCGGCGGGTTTGGCCTGGA CACCGGCGGGGCCGGCGGGCGCGGCGGTGACGCCGGCTTGTTCCTCGGTGCCGCAGGGACCGGCGGCCAGGCCGCCCTCT CCCAAAACTTTATCGGTGCCGGCGGCACCGCCGGAGCCGGTGGTACCGGTGGGCTGTTCGCCAACGGCGGGGCCGGCGGG GCCGGCGGGTTTGGCGCGAATGGCGGGACCGGGGGGAACGGATTGCTCTTCGGCGCCGGCGGCACCGGCGGGGCGGGCAC GCTCGGCGCCGACGGCGGCGCCGGGGGGCACGGCGGGCTGTTCGGCGCCGGCGGCACTGGCGGTGCTGGCGGCAGCAGCG GCGGCACCTTCGGCGGCAACGGCGGCAGCGGCGGCAACGCCGGCCTACTCGCCCTCGGCGCCTCCGGCGGCGCCGGCGGC AGCGGCGGCAGCGCCTTAAATGTCGGCGGGACCGGCGGGGTCGGCGGGAACGGCGGCAGTGGCGGCTCGCTCTTCGGCTT CGGCGGTGCCGGCGGCACCGGTGGCTCCAGCGGCATCGGCAGCAGCGGCGGCACCGGCGGTGACGGCGGTACGGCCGGGG TGTTCGGCAAAAAAGGCGACGGCGGCGCCGGCGGGTTTGGCGCCGGTACCGGAGGTTATGGCGGTGTCGGCGGCAACGCC GTGCTGATCGGCAACGGCGGCAACGGCGGCAACGGCGGGAAAGCCGGCGGCACACCCGGCGCCGGCGGCACCAGCGGGCT GATCATCGGCGAGAACGGGCTCAACGGCCTGTAA
Upstream 100 bases:
>100_bases CCTTTCCCGGGCCGGAGTTATTCTGTAGCCCGCCGATTTTTGCTGGTGACGTTCCCCGGGTCGGCATGACAGAGCGGTCA TGCGTATTGGGAGGTGTCAG
Downstream 100 bases:
>100_bases CCGCGAACCGGCCATCAGACCAACAGCCGGCCAGCCATGGTCGGCCGGCCCAGATCCCCCAGCATCAGCCTGCGGGCTGT CCTTCAAGACACACCGGGTT
Product: PE-PGRS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQAYQALSAQAQAFHAQFVQAL TSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTNGAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAG GLIGNGGAGGAGGRASTGTGGAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGNGGAGGDAGMLSLGAAGGAGG SGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGGAGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGL VGNAGNGGNGGASANGAGAAGGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAGGILSGIGGTGGSGGIGTTGQ GGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGLFLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGG AGGFGANGGTGGNGLLFGAGGTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGKKGDGGAGGFGAGTGGYGGVGGNA VLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL
Sequences:
>Translated_837_residues MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQAYQALSAQAQAFHAQFVQAL TSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTNGAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAG GLIGNGGAGGAGGRASTGTGGAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGNGGAGGDAGMLSLGAAGGAGG SGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGGAGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGL VGNAGNGGNGGASANGAGAAGGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAGGILSGIGGTGGSGGIGTTGQ GGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGLFLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGG AGGFGANGGTGGNGLLFGAGGTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGKKGDGGAGGFGAGTGGYGGVGGNA VLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL >Mature_836_residues SFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQAYQALSAQAQAFHAQFVQALT SGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTNGAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGG LIGNGGAGGAGGRASTGTGGAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGTG GAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGNGGAGGDAGMLSLGAAGGAGGS GGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGGAGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLV GNAGNGGNGGASANGAGAAGGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNA INEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAGGILSGIGGTGGSGGIGTTGQG GTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGLFLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGA GGFGANGGTGGNGLLFGAGGTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGGS GGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGKKGDGGAGGFGAGTGGYGGVGGNAV LIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000084 [H]
Pfam domain/function: PF00934 PE [H]
EC number: NA
Molecular weight: Translated: 68834; Mature: 68703
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCH AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCC GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT CCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN CCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEECCCC GGAGGDAGMLSLGAAGGAGGSGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC AGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG HHCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL CHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG EEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECC GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGKKGD CCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGAGGFGAGTGGYGGVGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure SFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCH AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCC GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT CCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN CCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEECCCC GGAGGDAGMLSLGAAGGAGGSGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC AGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG HHCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL CHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG EEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECC GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGKKGD CCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGAGGFGAGTGGYGGVGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]