Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
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Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is 148660038
Identifier: 148660038
GI number: 148660038
Start: 331067
End: 331687
Strand: Reverse
Name: 148660038
Synonym: MRA_0281
Alternate gene names: NA
Gene position: 331687-331067 (Counterclockwise)
Preceding gene: 148660040
Following gene: 148660037
Centisome position: 7.5
GC content: 61.84
Gene sequence:
>621_bases GTGCCGGACTTCCCGACGCAACGCGGTCGGCGGACCCAGGCCGCAATCGACGCCGCCGCGCGGACGGTCGTGGTGCGCAA CGGAATCCTGGCGACCACCGTCGCCGACATCACCGCCGAAGCCGGCCGCTCGGCGGCATCCTTTTACAACTACTACGACT CCAAAGAGGCGATGGTCCGGCAGTGGGCGCTGCGCTTCCGCGACGACGCCAACCAGCGGGCATTGTCGGTGATCCGGCAC GGCCTATCCGACCGCGAGCGCGCGTATGAAGCCGCTGCCGCCCATTGGTACACCTACCGCAACCGCCTCGCAGAAGCGAT CAGCGTGTCACAGTTGGCGATGGTCAGTGACGACTTCGCGCAATACTGGTCCGAAATATGCCAGATTCCAATATCGTTCA TCACCGAGACGGTCAAACGCGCTCAGGCGCACGGCTATTGCGTCGGCGATGACCCCCAGTTGATGGCCGAGGCGATTGTG GCAATGTTCAACCAGTTTTGCTACCTGCAGCTCAGCGGTAAGCGTTCACGCCGTGGACAACCTGACGATCAGGCGTGCAT CCAGACCTTGGCCAACATTTACTACCGCGCCATCTACAGTAAGGAGGACAGCTCAAATTGA
Upstream 100 bases:
>100_bases TCATCGTGCGGCTCCCATTGGCTCCCCGGGACGGCGGCCTGGCCAAGCTCTGAATCTGAATCTAACATCAGGTTCAGTTT TGTTCCAGGGAGGTGCCCAG
Downstream 100 bases:
>100_bases CTGGTCGTGCTGCCACGCCCGGGGTCATCCGAGAGTTCGTCGGGCTGCCGTCGCGAACCGCGGGGCGTGCGGCTGCCGGT GGGCACCCATGCCAGGGGCT
Product: putative transcriptional regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MPDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSAASFYNYYDSKEAMVRQWALRFRDDANQRALSVIRH GLSDRERAYEAAAAHWYTYRNRLAEAISVSQLAMVSDDFAQYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIV AMFNQFCYLQLSGKRSRRGQPDDQACIQTLANIYYRAIYSKEDSSN
Sequences:
>Translated_206_residues MPDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSAASFYNYYDSKEAMVRQWALRFRDDANQRALSVIRH GLSDRERAYEAAAAHWYTYRNRLAEAISVSQLAMVSDDFAQYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIV AMFNQFCYLQLSGKRSRRGQPDDQACIQTLANIYYRAIYSKEDSSN >Mature_205_residues PDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSAASFYNYYDSKEAMVRQWALRFRDDANQRALSVIRHG LSDRERAYEAAAAHWYTYRNRLAEAISVSQLAMVSDDFAQYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIVA MFNQFCYLQLSGKRSRRGQPDDQACIQTLANIYYRAIYSKEDSSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23274; Mature: 23143
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSAASFYNYYDSKEAMVR CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHH QWALRFRDDANQRALSVIRHGLSDRERAYEAAAAHWYTYRNRLAEAISVSQLAMVSDDFA HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIVAMFNQFCYLQLSGKRSRRGQ HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCC PDDQACIQTLANIYYRAIYSKEDSSN CCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSAASFYNYYDSKEAMVR CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHH QWALRFRDDANQRALSVIRHGLSDRERAYEAAAAHWYTYRNRLAEAISVSQLAMVSDDFA HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIVAMFNQFCYLQLSGKRSRRGQ HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCC PDDQACIQTLANIYYRAIYSKEDSSN CCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA