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The map label for this gene is ybgJ [H]

Identifier: 148660029

GI number: 148660029

Start: 317145

End: 317777

Strand: Reverse

Name: ybgJ [H]

Synonym: MRA_0272

Alternate gene names: 148660029

Gene position: 317777-317145 (Counterclockwise)

Preceding gene: 148660030

Following gene: 148660028

Centisome position: 7.19

GC content: 69.04

Gene sequence:

>633_bases
ATGGACGCGGCATTGGCCTGCACCGTGCTCGACTACGGCGACCATGCGCTGATGCTGCAATGTGACAGCACCGCTGACGC
AATGGCATGGACCGATGCATTGCGAGCCGCGGCGCTACCCGGTGTGGTCGACATCGTTGCGGCCTCGCGCACCGTATTGG
TGAAGCTGGACGCGCCCCGCTACCAAGGGGTCACCCGTCAGCGGCTGCGCAGGTTGCGGGTCACCCCCGAGGCGGTGGCT
GCGGCCGATCACCGATGCGACCTGGTAATCGACGTCGTCTACGACGGCCCAGACCTCGCCGAGGTCGCCCGCTGCACCGG
CCTGACCACCGCAGCGGTCATCAACGCCCACACCGCCACCGGATGGCGGGCGGGATTCAGTGGGTCCGCCCCGGGGTTCG
CCTACCTGATCGACGGCGACCCGAGCCTGCGGGTGCCGCGCCGGCCCGAACGGCGCACCTCGATGCCGCCCGGATCGGTC
GCCCTCGCCGACGGATTCAGCGCGATATATCCATCTCAAGCGCCCAGCGATTGGCAGATCATCGGCCACACCGACGCGGT
CCTGTGGGATGTCGACCGACCCCAGCCGGCGCTGCTCACACCGGGCATGTGGGTTCAGTTCCGGGCCGCCTGA

Upstream 100 bases:

>100_bases
CATGAGCATTTGCTAAGGCACCTCTGGCAGTCTCGAAAATCCCTGGCCGAGCCGAAGATTGCAGCGCTACCGTCGACGCA
TGAGTGTGATGGACGTCTTT

Downstream 100 bases:

>100_bases
GCTGGAGGAAGCAGCCATGACAACACTGGAAATCCTGCGCAGCGGACCGCTGGCCCTCGTCGAAGACCTCGGCCGTGCCG
GACTGGCCCATCTCGGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MDAALACTVLDYGDHALMLQCDSTADAMAWTDALRAAALPGVVDIVAASRTVLVKLDAPRYQGVTRQRLRRLRVTPEAVA
AADHRCDLVIDVVYDGPDLAEVARCTGLTTAAVINAHTATGWRAGFSGSAPGFAYLIDGDPSLRVPRRPERRTSMPPGSV
ALADGFSAIYPSQAPSDWQIIGHTDAVLWDVDRPQPALLTPGMWVQFRAA

Sequences:

>Translated_210_residues
MDAALACTVLDYGDHALMLQCDSTADAMAWTDALRAAALPGVVDIVAASRTVLVKLDAPRYQGVTRQRLRRLRVTPEAVA
AADHRCDLVIDVVYDGPDLAEVARCTGLTTAAVINAHTATGWRAGFSGSAPGFAYLIDGDPSLRVPRRPERRTSMPPGSV
ALADGFSAIYPSQAPSDWQIIGHTDAVLWDVDRPQPALLTPGMWVQFRAA
>Mature_210_residues
MDAALACTVLDYGDHALMLQCDSTADAMAWTDALRAAALPGVVDIVAASRTVLVKLDAPRYQGVTRQRLRRLRVTPEAVA
AADHRCDLVIDVVYDGPDLAEVARCTGLTTAAVINAHTATGWRAGFSGSAPGFAYLIDGDPSLRVPRRPERRTSMPPGSV
ALADGFSAIYPSQAPSDWQIIGHTDAVLWDVDRPQPALLTPGMWVQFRAA

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=203, Percent_Identity=33.4975369458128, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 22466; Mature: 22466

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAALACTVLDYGDHALMLQCDSTADAMAWTDALRAAALPGVVDIVAASRTVLVKLDAPR
CCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHEEEECCCEEEEEECCCC
YQGVTRQRLRRLRVTPEAVAAADHRCDLVIDVVYDGPDLAEVARCTGLTTAAVINAHTAT
CCCHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEECCCCC
GWRAGFSGSAPGFAYLIDGDPSLRVPRRPERRTSMPPGSVALADGFSAIYPSQAPSDWQI
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCEEEECCCCEECCCCCCCCCEE
IGHTDAVLWDVDRPQPALLTPGMWVQFRAA
EECCCEEEEECCCCCCCEECCCCEEEEEEC
>Mature Secondary Structure
MDAALACTVLDYGDHALMLQCDSTADAMAWTDALRAAALPGVVDIVAASRTVLVKLDAPR
CCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHEEEECCCEEEEEECCCC
YQGVTRQRLRRLRVTPEAVAAADHRCDLVIDVVYDGPDLAEVARCTGLTTAAVINAHTAT
CCCHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEECCCCC
GWRAGFSGSAPGFAYLIDGDPSLRVPRRPERRTSMPPGSVALADGFSAIYPSQAPSDWQI
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCEEEECCCCEECCCCCCCCCEE
IGHTDAVLWDVDRPQPALLTPGMWVQFRAA
EECCCEEEEECCCCCCCEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]