Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
---|---|
Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is narK3 [H]
Identifier: 148660026
GI number: 148660026
Start: 314121
End: 315530
Strand: Reverse
Name: narK3 [H]
Synonym: MRA_0269
Alternate gene names: 148660026
Gene position: 315530-314121 (Counterclockwise)
Preceding gene: 148660027
Following gene: 148660025
Centisome position: 7.14
GC content: 63.9
Gene sequence:
>1410_bases ATGGGCCGTTCCCACCAGATCTCCGACTGGGATCCCGAAGACTCGGTGGCGTGGGAGGCCGGCAACAAATTCATCGCCCG ACGCAATCTGATCTGGTCGGTGGCCGCCGAGCACGTCGGATTTTCCGTCTGGTCCCTCTGGTCGGTGATGGTGCTGTTCA TGCCCACATCGGTGTACGGCTTTTCCGCCGGCGACAAGTTCCTGCTCGGCGCCACCGCGACCTTGGTCGGGGCATGCCTG CGCTTCCCTTACACATTTGCCACCGCAAAGTTCGGGGGGCGCAACTGGACCATCTTTTCCGCACTGGTGCTGTTGATTCC GACCGTTGGCAGCATTCTGTTGCTGGCCAACCCTGGTTTGCCACTGTGGCCGTATCTGGTGTGCGGTGCGCTAGCCGGCC TCGGCGGCGGCAACTTCGCCGCCTCCATGACGAACATCAACGCTTTCTTTCCGCAACGACTCAAGGGCGCCGCGCTTGCG CTCAACGCGGGTGGCGGCAACCTCGGGGTGCCGATGGTGCAGTTGGTCGGCCTGCTGGTGATCGCAACGGCCGGTGACCG CGAGCCCTACTGGGTGTGCGCGATATATCTGGTGCTGCTGGCGGTCGCCGGCCTCGGCGCCGCACTGTACATGGACAACC TGACGGAGTATCGCATCGAGCTGAACACCATGCGTGCGGTAGTGTCCGAGCCGCACACCTGGGTGATCTCGCTGCTGTAC ATCGGCACTTTCGGCTCGTTCATCGGGTTCTCTTTCGCATTCGGTCAGGTGCTGCAGATCAACTTCATCGCCAGCGGTCA GAGCACGGCGCAGGCCTCGCTGCATGCGGCCCAGATCGCCTTCCTGGGGCCGCTATTGGGATCGCTGTCCCGAATATATG GCGGCAAGCTCGCCGACCGTATCGGTGGCGGCCGAGTCACCCTAGCTGCCTTCTGCGCCATGCTGCTGGCCACCGGAATA CTCATCAGCGCAAGCACTTTCGGTGACCACCTGGCCGGGCCGATGCCGACTGCGACGATGGTCGGCTACGTCATCGGCTT CACGGCTCTGTTCATTTTGTCCGGCATCGGCAATGGCTCTGTGTACAAGATGATTCCGTCGATCTTCGAGGCGCGCAGCC ATTCGCTGCAGATCAGTGAAGCCGAGCGCAGGCAGTGGTCGCGGTCGATGTCAGGCGCGCTGATCGGCCTGGCCGGGGCG GTCGGCGCGCTCGGCGGAGTGGGCGTCAACCTGGCTCTGCGAGAGTCCTACCTGACCAGTGGCACGGCCACCTCGGCATT TTGGGCCTTCGGGGTGTTCTACCTGGTCGCCTCGGTGCTGACCTGGGCGATTTATGTGCGTCGGGGCCTAAAGAGCGCCG GCGAGCTCGTGCCGGCGACCACCGCACCCGCGGGCTTGGCCTACGTCTAG
Upstream 100 bases:
>100_bases CCGTGTGAGCGAAAGTTCACGCCGGGGTCACTACCGGAAGCGCCCGGGCAACAAAGGATTTCTAGCGTGATCGAGAACGT CGATCACGATAGGGGTCAGT
Downstream 100 bases:
>100_bases CGCCACGCCCGAAGCCACAGAGGTGGGTATCGGCAATGGGCAATCCGGCAGCAATTGCCTGGTAACGCGACTGAAACCTC ACAGGCCTAGACACGTCATA
Product: integral membrane nitrite extrusion protein NarK3
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MGRSHQISDWDPEDSVAWEAGNKFIARRNLIWSVAAEHVGFSVWSLWSVMVLFMPTSVYGFSAGDKFLLGATATLVGACL RFPYTFATAKFGGRNWTIFSALVLLIPTVGSILLLANPGLPLWPYLVCGALAGLGGGNFAASMTNINAFFPQRLKGAALA LNAGGGNLGVPMVQLVGLLVIATAGDREPYWVCAIYLVLLAVAGLGAALYMDNLTEYRIELNTMRAVVSEPHTWVISLLY IGTFGSFIGFSFAFGQVLQINFIASGQSTAQASLHAAQIAFLGPLLGSLSRIYGGKLADRIGGGRVTLAAFCAMLLATGI LISASTFGDHLAGPMPTATMVGYVIGFTALFILSGIGNGSVYKMIPSIFEARSHSLQISEAERRQWSRSMSGALIGLAGA VGALGGVGVNLALRESYLTSGTATSAFWAFGVFYLVASVLTWAIYVRRGLKSAGELVPATTAPAGLAYV
Sequences:
>Translated_469_residues MGRSHQISDWDPEDSVAWEAGNKFIARRNLIWSVAAEHVGFSVWSLWSVMVLFMPTSVYGFSAGDKFLLGATATLVGACL RFPYTFATAKFGGRNWTIFSALVLLIPTVGSILLLANPGLPLWPYLVCGALAGLGGGNFAASMTNINAFFPQRLKGAALA LNAGGGNLGVPMVQLVGLLVIATAGDREPYWVCAIYLVLLAVAGLGAALYMDNLTEYRIELNTMRAVVSEPHTWVISLLY IGTFGSFIGFSFAFGQVLQINFIASGQSTAQASLHAAQIAFLGPLLGSLSRIYGGKLADRIGGGRVTLAAFCAMLLATGI LISASTFGDHLAGPMPTATMVGYVIGFTALFILSGIGNGSVYKMIPSIFEARSHSLQISEAERRQWSRSMSGALIGLAGA VGALGGVGVNLALRESYLTSGTATSAFWAFGVFYLVASVLTWAIYVRRGLKSAGELVPATTAPAGLAYV >Mature_468_residues GRSHQISDWDPEDSVAWEAGNKFIARRNLIWSVAAEHVGFSVWSLWSVMVLFMPTSVYGFSAGDKFLLGATATLVGACLR FPYTFATAKFGGRNWTIFSALVLLIPTVGSILLLANPGLPLWPYLVCGALAGLGGGNFAASMTNINAFFPQRLKGAALAL NAGGGNLGVPMVQLVGLLVIATAGDREPYWVCAIYLVLLAVAGLGAALYMDNLTEYRIELNTMRAVVSEPHTWVISLLYI GTFGSFIGFSFAFGQVLQINFIASGQSTAQASLHAAQIAFLGPLLGSLSRIYGGKLADRIGGGRVTLAAFCAMLLATGIL ISASTFGDHLAGPMPTATMVGYVIGFTALFILSGIGNGSVYKMIPSIFEARSHSLQISEAERRQWSRSMSGALIGLAGAV GALGGVGVNLALRESYLTSGTATSAFWAFGVFYLVASVLTWAIYVRRGLKSAGELVPATTAPAGLAYV
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=470, Percent_Identity=34.6808510638298, Blast_Score=229, Evalue=4e-61, Organism=Escherichia coli, GI1787743, Length=467, Percent_Identity=33.8329764453961, Blast_Score=206, Evalue=4e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49357; Mature: 49226
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSHQISDWDPEDSVAWEAGNKFIARRNLIWSVAAEHVGFSVWSLWSVMVLFMPTSVYG CCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHEE FSAGDKFLLGATATLVGACLRFPYTFATAKFGGRNWTIFSALVLLIPTVGSILLLANPGL CCCCCCEEEHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCCC PLWPYLVCGALAGLGGGNFAASMTNINAFFPQRLKGAALALNAGGGNLGVPMVQLVGLLV CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH IATAGDREPYWVCAIYLVLLAVAGLGAALYMDNLTEYRIELNTMRAVVSEPHTWVISLLY EEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH IGTFGSFIGFSFAFGQVLQINFIASGQSTAQASLHAAQIAFLGPLLGSLSRIYGGKLADR HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IGGGRVTLAAFCAMLLATGILISASTFGDHLAGPMPTATMVGYVIGFTALFILSGIGNGS CCCCEEHHHHHHHHHHHHHHHHEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH VYKMIPSIFEARSHSLQISEAERRQWSRSMSGALIGLAGAVGALGGVGVNLALRESYLTS HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEHEEHHHHHCC GTATSAFWAFGVFYLVASVLTWAIYVRRGLKSAGELVPATTAPAGLAYV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GRSHQISDWDPEDSVAWEAGNKFIARRNLIWSVAAEHVGFSVWSLWSVMVLFMPTSVYG CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHEE FSAGDKFLLGATATLVGACLRFPYTFATAKFGGRNWTIFSALVLLIPTVGSILLLANPGL CCCCCCEEEHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCCC PLWPYLVCGALAGLGGGNFAASMTNINAFFPQRLKGAALALNAGGGNLGVPMVQLVGLLV CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH IATAGDREPYWVCAIYLVLLAVAGLGAALYMDNLTEYRIELNTMRAVVSEPHTWVISLLY EEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH IGTFGSFIGFSFAFGQVLQINFIASGQSTAQASLHAAQIAFLGPLLGSLSRIYGGKLADR HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IGGGRVTLAAFCAMLLATGILISASTFGDHLAGPMPTATMVGYVIGFTALFILSGIGNGS CCCCEEHHHHHHHHHHHHHHHHEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH VYKMIPSIFEARSHSLQISEAERRQWSRSMSGALIGLAGAVGALGGVGVNLALRESYLTS HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEHEEHHHHHCC GTATSAFWAFGVFYLVASVLTWAIYVRRGLKSAGELVPATTAPAGLAYV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]